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Regulator of chromosome condensation (RCC1) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 822208, updated on 18-Sep-2024

Summary

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Official Full Name
Regulator of chromosome condensation (RCC1) family protein
Primary source
TAIR:AT3G26100
Locus tag
AT3G26100
See related
Araport:AT3G26100
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
6
Sequence:
Chromosome: 3; NC_003074.8 (9536859..9540453)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene CAAX amino terminal protease family protein Neighboring gene REGULATOR OF G-PROTEIN SIGNALING 1 Neighboring gene Anther-specific protein agp1-like protein Neighboring gene Pyridoxal-5'-phosphate-dependent enzyme family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of nuclear pore complex components in Arabidopsis thaliana. Tamura K, et al. Plant Cell, 2010 Dec. PMID 21189294, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001338783.1
NM_001338784.1
NM_113515.4
NM_202633.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Regulator of chromosome condensation (RCC1) family protein
NP_566789.1
  • Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT3G15430.2); Has 17367 Blast hits to 5203 proteins in 406 species: Archae - 82; Bacteria - 2003; Metazoa - 7050; Fungi - 936; Plants - 2608; Viruses - 2; Other Eukaryotes - 4686 (source: NCBI BLink).
NP_974362.1
  • Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT3G15430.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    9536859..9540453
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001338781.1 → NP_001326162.1  Regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VGK9, Q93V68
    Conserved Domains (1) summary
    COG5184
    Location:54 → 427
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  2. NM_001338782.1 → NP_001326165.1  Regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VGK9, Q93V68
    Conserved Domains (1) summary
    COG5184
    Location:54 → 427
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  3. NM_113515.4 → NP_566789.1  Regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566789.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VGK9, Q93V68
    Conserved Domains (1) summary
    COG5184
    Location:54 → 427
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  4. NM_202633.3 → NP_974362.1  Regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974362.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VES6, A0A5S9XHB7, A0A654FAT8, Q9LU80
    Conserved Domains (1) summary
    COG5184
    Location:154 → 527
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  5. NM_001338783.1 → NP_001326164.1  Regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VES6, A0A5S9XHB7, A0A654FAT8, Q9LU80
    Conserved Domains (1) summary
    COG5184
    Location:154 → 527
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  6. NM_001338784.1 → NP_001326163.1  Regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VES6, A0A5S9XHB7, A0A654FAT8, Q9LU80
    Conserved Domains (1) summary
    COG5184
    Location:154 → 527
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
Nucleotide Protein
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