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ATN1 Protein kinase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 822378, updated on 18-Sep-2024

Summary

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Official Symbol
ATN1
Official Full Name
Protein kinase superfamily protein
Primary source
TAIR:AT3G27560
Locus tag
AT3G27560
See related
Araport:AT3G27560
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Summary
encodes a protein with kinase domains, including catalytic domains for serine/threonine as well as tyrosine kinases. a member of multi-gene family and is expressed in all tissues examined.
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Genomic context

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See ATN1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Sequence:
Chromosome: 3; NC_003074.8 (10210417..10213093, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene RNA-binding CRS1 / YhbY (CRM) domain protein Neighboring gene tRNA-Asp Neighboring gene Sucrase/ferredoxin-like family protein Neighboring gene Protein kinase superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. HDA18 affects cell fate in Arabidopsis root epidermis via histone acetylation at four kinase genes. Liu C, et al. Plant Cell, 2013 Jan. PMID 23362208, Free PMC Article
  2. Genome-wide analysis and experimentation of plant serine/ threonine/tyrosine-specific protein kinases. Rudrabhatla P, et al. Plant Mol Biol, 2006 Jan. PMID 16429265
  3. Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Heazlewood JL, et al. Plant Cell, 2004 Jan. PMID 14671022, Free PMC Article
  4. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
  5. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_113672.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein serine/threonine kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables protein serine/threonine/tyrosine kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables protein tyrosine kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within root epidermal cell differentiation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion HDA PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Protein kinase superfamily protein
NP_189393.1
  • ATN1; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein serine/threonine kinase activity, protein tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G40540.1); Has 126902 Blast hits to 125519 proteins in 4868 species: Archae - 154; Bacteria - 14147; Metazoa - 47911; Fungi - 11907; Plants - 32573; Viruses - 495; Other Eukaryotes - 19715 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    10210417..10213093 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113672.3 → NP_189393.1  Protein kinase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_189393.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VL01, A0A654FB84, Q39029, Q9LT56
    Conserved Domains (1) summary
    cd13999
    Location:32 → 286
    STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases
Nucleotide Protein
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