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ATPK7 Protein kinase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 822380, updated on 7-Sep-2023

Summary

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Gene symbol
ATPK7
Gene description
Protein kinase superfamily protein
Primary source
Araport:AT3G27580
Locus tag
AT3G27580
See related
TAIR:AT3G27580
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
D6 PROTEIN KINASE LIKE 3; D6PKL3
Summary
a member of a subfamily of Ser/Thr PKs in plants.
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Genomic context

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See ATPK7 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (10217417..10220061, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene Sucrase/ferredoxin-like family protein Neighboring gene reverse transcriptase family protein Neighboring gene SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis Protein Kinase D6PKL3 Is Involved in the Formation of Distinct Plasma Membrane Aperture Domains on the Pollen Surface. Lee BH, et al. Plant Cell, 2018 Sep. PMID 30150313, Free PMC Article
  2. Characterization of a gene that encodes a homologue of protein kinase in Arabidopsis thaliana. Hayashida N, et al. Gene, 1992 Nov 16. PMID 1446831
  3. Roles of AGCVIII Kinases in the Hypocotyl Phototropism of Arabidopsis Seedlings. Haga K, et al. Plant Cell Physiol, 2018 May 1. PMID 29490064
  4. D6PK AGCVIII kinases are required for auxin transport and phototropic hypocotyl bending in Arabidopsis. Willige BC, et al. Plant Cell, 2013 May. PMID 23709629, Free PMC Article
  5. Structural and functional insights into the regulation of Arabidopsis AGC VIIIa kinases. Zegzouti H, et al. J Biol Chem, 2006 Nov 17. PMID 16973627

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001035707.3
NM_113674.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein kinase activity TAS
Traceable Author Statement
more info
 PubMed 
enables protein serine/threonine kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in basipetal auxin transport TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within phototropism IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within pollen aperture formation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within pollen development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in protein phosphorylation TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane region IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Protein kinase superfamily protein
NP_001030784.1
  • ATPK7; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_189395.1
  • ATPK7; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 118014 Blast hits to 91974 proteins in 2859 species: Archae - 52; Bacteria - 14000; Metazoa - 46533; Fungi - 13234; Plants - 22437; Viruses - 379; Other Eukaryotes - 21379 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    10217417..10220061 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113674.4 → NP_189395.1  Protein kinase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_189395.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q05999, Q67YR9
    UniProtKB/TrEMBL
    A0A178VEX9, A0A5S9XG81
    Conserved Domains (1) summary
    cd05574
    Location:180 → 540
    STKc_phototropin_like; Catalytic domain of Phototropin-like Serine/Threonine Kinases

  2. NM_001035707.3 → NP_001030784.1  Protein kinase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001030784.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q05999, Q67YR9
    UniProtKB/TrEMBL
    A0A178VEX9, A0A5S9XG81
    Conserved Domains (1) summary
    cd05574
    Location:180 → 540
    STKc_phototropin_like; Catalytic domain of Phototropin-like Serine/Threonine Kinases
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q05999.1

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