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Mevalonate/galactokinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 823331, updated on 18-Sep-2024

Summary

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Official Full Name
Mevalonate/galactokinase family protein
Primary source
TAIR:AT3G42850
Locus tag
AT3G42850
See related
Araport:AT3G42850
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
28
Sequence:
Chromosome: 3; NC_003074.8 (14940002..14945319, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene zinc knuckle (CCHC-type) family protein Neighboring gene heat shock protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The role of arabinokinase in arabinose toxicity in plants. Behmüller R, et al. Plant J, 2016 Aug. PMID 27145098
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables L-arabinokinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within arabinose metabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Mevalonate/galactokinase family protein
NP_189871.1
  • Mevalonate/galactokinase family protein; FUNCTIONS IN: kinase activity, phosphotransferase activity, alcohol group as acceptor, galactokinase activity, ATP binding; INVOLVED IN: metabolic process, phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GHMP kinase (InterPro:IPR006204), Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Galactokinase, glycosyltransferase (InterPro:IPR012369), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: arabinose kinase (TAIR:AT4G16130.1); Has 3577 Blast hits to 3572 proteins in 1442 species: Archae - 89; Bacteria - 2609; Metazoa - 174; Fungi - 132; Plants - 130; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    14940002..14945319 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001339089.1 → NP_001327277.1  Mevalonate/galactokinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VEG1, A0A1I9LRU1, A0A654FI53

  2. NM_114153.2 → NP_189871.1  Mevalonate/galactokinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_189871.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VEG1, A0A654FI53, Q9M1M0
    Conserved Domains (5) summary
    COG0153
    Location:468 → 952
    GalK; Galactokinase [Carbohydrate transport and metabolism]
    pfam00288
    Location:617 → 685
    GHMP_kinases_N; GHMP kinases N terminal domain
    pfam08544
    Location:853 → 934
    GHMP_kinases_C; GHMP kinases C terminal
    pfam10509
    Location:480 → 521
    GalKase_gal_bdg; Galactokinase galactose-binding signature
    cl10013
    Location:14 → 226
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein
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