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NACA2 nascent polypeptide-associated complex subunit alpha-like protein 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824109, updated on 18-Sep-2024

Summary

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Official Symbol
NACA2
Official Full Name
nascent polypeptide-associated complex subunit alpha-like protein 2
Primary source
TAIR:AT3G49470
Locus tag
AT3G49470
See related
Araport:AT3G49470
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
nascent polypeptide-associated complex subunit alpha-like protein 2
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Genomic context

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See NACA2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Sequence:
Chromosome: 3; NC_003074.8 (18340934..18342644)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene 60S acidic ribosomal-like protein Neighboring gene F-box/FBD/LRR protein Neighboring gene uncharacterized protein Neighboring gene RNA-dependent RNA polymerase 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. LIK1, a CERK1-interacting kinase, regulates plant immune responses in Arabidopsis. Le MH, et al. PLoS One, 2014. PMID 25036661, Free PMC Article
  2. Proteomic analysis of the 26S proteasome reveals its direct interaction with transit peptides of plastid protein precursors for their degradation. Sako K, et al. J Proteome Res, 2014 Jul 3. PMID 24846764
  3. Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. Bach-Pages M, et al. Biomolecules, 2020 Apr 24. PMID 32344669, Free PMC Article
  4. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
  5. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001339421.1
NM_114807.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol HDA PubMed 
part_of nascent polypeptide-associated complex IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
nascent polypeptide-associated complex subunit alpha-like protein 2
NP_190516.1
  • nascent polypeptide-associated complex subunit alpha-like protein 2 (NACA2); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex (NAC), alpha subunit family protein (TAIR:AT4G10480.1); Has 1390 Blast hits to 1373 proteins in 295 species: Archae - 27; Bacteria - 8; Metazoa - 613; Fungi - 295; Plants - 175; Viruses - 7; Other Eukaryotes - 265 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    18340934..18342644
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_114807.5 → NP_190516.1  nascent polypeptide-associated complex subunit alpha-like protein 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190516.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q94JX9, Q9S7G0
    UniProtKB/TrEMBL
    A0A178VM28, A0A5S9XJ93
    Conserved Domains (2) summary
    cd14358
    Location:180 → 216
    UBA_NAC_euk; UBA-like domain found in nascent polypeptide-associated complex subunit alpha (NACA) and its homologs mainly found in eukaryotes
    cd22054
    Location:84 → 131
    NAC_NACA; nascent polypeptide-associated complex (NAC), alpha subunit

  2. NM_001339421.1 → NP_001327011.1  nascent polypeptide-associated complex subunit alpha-like protein 2 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LR04
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q94JX9.2

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