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ATG2 metallopeptidase M24 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824343, updated on 18-Sep-2024

Summary

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Official Symbol
ATG2
Official Full Name
metallopeptidase M24 family protein
Primary source
TAIR:AT3G51800
Locus tag
AT3G51800
See related
Araport:AT3G51800
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
A. THALIANA ERBB-3 BINDING PROTEIN 1; ATEBP1; EBP1; ERBB-3 BINDING PROTEIN 1
Summary
putative nuclear DNA-binding protein G2p (AtG2) mRNA
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Genomic context

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See ATG2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Sequence:
Chromosome: 3; NC_003074.8 (19210914..19213776, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene BCL-2-associated athanogene 4 Neighboring gene transmembrane protein G1P-related 1 Neighboring gene ncRNA Neighboring gene Stress induced protein Neighboring gene UbiA prenyltransferase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of a novel cell cycle-related gene from Arabidopsis. Zhang WK, et al. J Exp Bot, 2005 Mar. PMID 15689342
  2. EBP1 nuclear accumulation negatively feeds back on FERONIA-mediated RALF1 signaling. Li C, et al. PLoS Biol, 2018 Oct. PMID 30339663, Free PMC Article
  3. AtATG genes, homologs of yeast autophagy genes, are involved in constitutive autophagy in Arabidopsis root tip cells. Inoue Y, et al. Plant Cell Physiol, 2006 Dec. PMID 17085765
  4. EBP1 regulates organ size through cell growth and proliferation in plants. Horváth BM, et al. EMBO J, 2006 Oct 18. PMID 17024182, Free PMC Article
  5. cDNA Library Screening Identifies Protein Interactors Potentially Involved in Non-Telomeric Roles of Arabidopsis Telomerase. Dokládal L, et al. Front Plant Sci, 2015. PMID 26617625, Free PMC Article

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001203131.1
NM_115039.4
NM_180348.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
NOT involved_in DNA-templated transcription IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in auxin-activated signaling pathway IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in cell cycle G1/S phase transition IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in regulation of cell division IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of cell growth IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol HDA PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
NOT located_in cytosol RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in nucleolus HDA PubMed 
located_in nucleolus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
metallopeptidase M24 family protein
NP_001190060.1
  • ATG2; FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Proliferation-associated protein 1 (InterPro:IPR004545), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 2A (TAIR:AT2G44180.1).
NP_190748.1
  • ATG2; FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; LOCATED IN: nucleolus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Proliferation-associated protein 1 (InterPro:IPR004545), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 2A (TAIR:AT2G44180.1); Has 7405 Blast hits to 7404 proteins in 2313 species: Archae - 229; Bacteria - 4673; Metazoa - 502; Fungi - 534; Plants - 197; Viruses - 0; Other Eukaryotes - 1270 (source: NCBI BLink).
NP_850679.1
  • ATG2; FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; LOCATED IN: nucleolus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Proliferation-associated protein 1 (InterPro:IPR004545), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 2A (TAIR:AT2G44180.1); Has 7345 Blast hits to 7344 proteins in 2293 species: Archae - 229; Bacteria - 4620; Metazoa - 502; Fungi - 534; Plants - 197; Viruses - 0; Other Eukaryotes - 1263 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    19210914..19213776 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115039.4 → NP_190748.1  metallopeptidase M24 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190748.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B9DFJ0, F4J4J3, F4J4J5, Q96327, Q9C5I5
    UniProtKB/TrEMBL
    A0A178VB22, A0A5S9XKQ0
    Conserved Domains (1) summary
    TIGR00495
    Location:1 → 385
    crvDNA_42K; 42K curved DNA binding protein

  2. NM_180348.3 → NP_850679.1  metallopeptidase M24 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850679.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q96327
    Conserved Domains (1) summary
    TIGR00495
    Location:1 → 394
    crvDNA_42K; 42K curved DNA binding protein

  3. NM_001203131.1 → NP_001190060.1  metallopeptidase M24 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190060.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q96327
    Conserved Domains (1) summary
    TIGR00495
    Location:1 → 378
    crvDNA_42K; 42K curved DNA binding protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q96327.1

Gene LinkOut

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