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proteasome inhibitor-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824564, updated on 18-Sep-2024

Summary

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Official Full Name
proteasome inhibitor-like protein
Primary source
TAIR:AT3G53970
Locus tag
AT3G53970
See related
Araport:AT3G53970
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
8
Sequence:
Chromosome: 3; NC_003074.8 (19985087..19987377)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Major facilitator superfamily protein Neighboring gene tRNA-Gly Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene Adenine nucleotide alpha hydrolases-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis PROTEASOME REGULATOR1 is required for auxin-mediated suppression of proteasome activity and regulates auxin signalling. Yang BJ, et al. Nat Commun, 2016 Apr 25. PMID 27109828, Free PMC Article
  2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_115257.6
NM_202697.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
  
enables proteasome binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to auxin stimulus IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within negative regulation of proteasomal protein catabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytosol HDA PubMed 
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
proteasome inhibitor-like protein
NP_190965.1
  • proteasome inhibitor-related; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome Inhibitor PI31 (InterPro:IPR021625), PI31 proteasome regulator (InterPro:IPR013886); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48530.1); Has 3872 Blast hits to 2739 proteins in 261 species: Archae - 2; Bacteria - 242; Metazoa - 2901; Fungi - 341; Plants - 91; Viruses - 17; Other Eukaryotes - 278 (source: NCBI BLink).
NP_974426.1
  • proteasome inhibitor-related; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome Inhibitor PI31 (InterPro:IPR021625); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    19985087..19987377
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_202697.4 → NP_974426.1  proteasome inhibitor-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974426.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VD10, A0A384KYJ5, A0A5S9XLC1, F4JBP8
    Conserved Domains (1) summary
    pfam11566
    Location:14 → 156
    PI31_Prot_N; PI31 proteasome regulator N-terminal

  2. NM_115257.6 → NP_190965.1  proteasome inhibitor-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190965.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9M330
    UniProtKB/TrEMBL
    A0A178VB57, A0A5S9XLC1
    Conserved Domains (2) summary
    pfam08577
    Location:197 → 266
    PI31_Prot_C; PI31 proteasome regulator
    pfam11566
    Location:14 → 156
    PI31_Prot_N; PI31 proteasome regulator N-terminal
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9M330.1

Gene LinkOut

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