U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MICPUN_95362 predicted protein [ Micromonas commoda ]

Gene ID: 8246902, updated on 16-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
MICPUN_95362
Gene description
predicted protein
Locus tag
MICPUN_95362
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Micromonas commoda (strain: RCC299)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See MICPUN_95362 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
1
Sequence:
Chromosome: 10; NC_013047.1 (1139007..1139826, complement)

Chromosome 10 - NC_013047.1Genomic Context describing neighboring genes Neighboring gene predicted protein Neighboring gene transcription initiation factor IID, 31kD subunit Neighboring gene glycoside hydrolase family 5 protein Neighboring gene predicted protein Neighboring gene predicted protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_013047.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Worden AZ, et al. Science, 2009 Apr 10. PMID 19359590
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
predicted protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013047.1 Reference assembly

    Range
    1139007..1139826 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002508860.1 → XP_002508906.1  predicted protein [Micromonas commoda]

    See identical proteins and their annotated locations for XP_002508906.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C1FHU8
    Conserved Domains (1) summary
    cd06822
    Location:19 → 237
    PLPDE_III_YBL036c_euk; Pyridoxal 5-phosphate (PLP)-binding TIM barrel domain of Type III PLP-Dependent Enzymes, Eukaryotic YBL036c-like proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials