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Hs1pro-1 protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824750, updated on 18-Sep-2024

Summary

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Official Full Name
Hs1pro-1 protein
Primary source
TAIR:AT3G55840
Locus tag
AT3G55840
See related
Araport:AT3G55840
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (20716995..20718866, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Pyruvate kinase family protein Neighboring gene Fasciclin-like arabinogalactan family protein Neighboring gene Nucleotide-diphospho-sugar transferases superfamily protein Neighboring gene Amidohydrolase family Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. AKINbetagamma contributes to SnRK1 heterotrimeric complexes and interacts with two proteins implicated in plant pathogen resistance through its KIS/GBD sequence. Gissot L, et al. Plant Physiol, 2006 Nov. PMID 17028154, Free PMC Article
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_115442.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in tryptophan catabolic process to kynurenine IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Hs1pro-1 protein
NP_191143.1
  • Hs1pro-1 protein; CONTAINS InterPro DOMAIN/s: Hs1pro-1, C-terminal (InterPro:IPR009743), Hs1pro-1, N-terminal (InterPro:IPR009869); BEST Arabidopsis thaliana protein match is: ortholog of sugar beet HS1 PRO-1 2 (TAIR:AT2G40000.1); Has 60 Blast hits to 60 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    20716995..20718866 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115442.2 → NP_191143.1  Hs1pro-1 protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191143.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q2QCL4, Q8LEJ2, Q9LY61
    UniProtKB/TrEMBL
    A0A654FG55
    Conserved Domains (2) summary
    pfam07014
    Location:168 → 427
    Hs1pro-1_C; Hs1pro-1 protein C-terminus
    pfam07231
    Location:1 → 165
    Hs1pro-1_N; Hs1pro-1 N-terminus
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LY61.1

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