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ROH1, putative (DUF793) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826732, updated on 18-Sep-2024

Summary

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Official Full Name
ROH1, putative (DUF793)
Primary source
TAIR:AT4G11300
Locus tag
AT4G11300
See related
Araport:AT4G11300
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F8L21.90; F8L21_90
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Genomic context

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Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (6872151..6873689, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 Neighboring gene Peroxidase superfamily protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Papain family cysteine protease

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_117201.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
ROH1, putative (DUF793)
NP_192869.1
  • CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT4G23530.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    6872151..6873689 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117201.4 → NP_192869.1  ROH1, putative (DUF793) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192869.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V1D1, A0A5S9XR94, Q9SUT1
    Conserved Domains (1) summary
    pfam05633
    Location:2 → 369
    BPS1; Protein BYPASS1-related
Nucleotide Protein
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