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RHA1A RING-H2 finger A1A [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826739, updated on 18-Sep-2024

Summary

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Official Symbol
RHA1A
Official Full Name
RING-H2 finger A1A
Primary source
TAIR:AT4G11370
Locus tag
AT4G11370
See related
Araport:AT4G11370
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F8L21.160; F8L21_160; RING-H2 finger A1A; RING-H2 FINGER PROTEIN RHA1A
Summary
Encodes a putative RING-H2 finger protein RHA1a.
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Genomic context

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See RHA1A in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (6907488..6908442)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene tRNA-Ala Neighboring gene RING-H2 finger A1B Neighboring gene Serine/Threonine kinase catalytic domain protein Neighboring gene pseudo Neighboring gene Adaptin family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Interactions between plant RING-H2 and plant-specific NAC (NAM/ATAF1/2/CUC2) proteins: RING-H2 molecular specificity and cellular localization. Greve K, et al. Biochem J, 2003 Apr 1. PMID 12646039, Free PMC Article
  2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_117208.4

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
RING-H2 finger A1A
NP_192876.1
  • RING-H2 finger A1A (RHA1A); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A1B (TAIR:AT4G11360.1); Has 7373 Blast hits to 7354 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 1768; Fungi - 541; Plants - 4120; Viruses - 12; Other Eukaryotes - 932 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    6907488..6908442
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117208.4 → NP_192876.1  RING-H2 finger A1A [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192876.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SUS4, Q9ZT52
    UniProtKB/TrEMBL
    A0A178V2F5
    Conserved Domains (1) summary
    pfam13639
    Location:84 → 130
    zf-RING_2; Ring finger domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SUS4.1

Gene LinkOut

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