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Uncharacterized protein family (UPF0041) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827120, updated on 18-Sep-2024

Summary

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Official Full Name
Uncharacterized protein family (UPF0041)
Primary source
TAIR:AT4G14695
Locus tag
AT4G14695
See related
Araport:AT4G14695
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 4
Exon count:
6
Sequence:
Chromosome: 4; NC_003075.7 (8419570..8421070)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene chaperone ClpB1-like protein Neighboring gene Pseudouridine synthase/archaeosine transglycosylase-like family protein Neighboring gene Chlorophyll A-B binding family protein Neighboring gene ncRNA Neighboring gene origin recognition complex 1 Neighboring gene RmlC-like cupins superfamily protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Heazlewood JL, et al. Plant Cell, 2004 Jan. PMID 14671022, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

NM_001084920.2
NM_001340956.1
NM_117552.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in mitochondrial pyruvate transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in mitochondrion HDA PubMed 

General protein information

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Preferred Names
Uncharacterized protein family (UPF0041)
NP_001078389.1
  • Uncharacterised protein family (UPF0041); INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0041) (TAIR:AT4G22310.1); Has 494 Blast hits to 494 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 128; Plants - 106; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink).
NP_001319940.1
  • Uncharacterised protein family (UPF0041); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0041) (TAIR:AT4G22310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    8419570..8421070
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001340956.1 → NP_001319940.1  Uncharacterized protein family (UPF0041) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L7H8
    UniProtKB/TrEMBL
    A0A5S9XSC9, A0A654FPP2
    Conserved Domains (1) summary
    pfam03650
    Location:5 → 108
    MPC; Uncharacterized protein family (UPF0041)

  2. NM_117552.4 → NP_567439.1  Uncharacterized protein family (UPF0041) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567439.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L7H8
    UniProtKB/TrEMBL
    A0A5S9XSC9, A0A654FPP2
    Conserved Domains (1) summary
    pfam03650
    Location:5 → 108
    MPC; Uncharacterized protein family (UPF0041)

  3. NM_001084920.2 → NP_001078389.1  Uncharacterized protein family (UPF0041) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078389.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8MQ95
    Conserved Domains (1) summary
    pfam03650
    Location:5 → 90
    MPC; uncharacterized protein family (UPF0041)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8L7H8.1

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