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Plant invertase/pectin methylesterase inhibitor superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827589, updated on 18-Sep-2024

Summary

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Official Full Name
Plant invertase/pectin methylesterase inhibitor superfamily protein
Primary source
TAIR:AT4G02250
Locus tag
AT4G02250
See related
Araport:AT4G02250
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T2H3.11; T2H3_11
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_003075.7 (983970..984523)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein Neighboring gene Ribosomal protein L19e family protein Neighboring gene AGAMOUS-like 51 Neighboring gene RELA/SPOT homolog 1 Neighboring gene root hair specific 13

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198
  2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

GeneRIFs: Gene References Into Functions

General gene information

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NM_116458.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables enzyme inhibitor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within negative regulation of catalytic activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Plant invertase/pectin methylesterase inhibitor superfamily protein
NP_192134.2
  • Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G55770.1); Has 90 Blast hits to 88 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    983970..984523
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116458.2 → NP_192134.2  Plant invertase/pectin methylesterase inhibitor superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192134.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4JHA1, O81420
    Conserved Domains (1) summary
    cl04375
    Location:22 → 158
    PMEI_like; pectin methylesterase inhibitor and related proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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