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transmembrane protein, putative (DUF1191) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828157, updated on 18-Sep-2024

Summary

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Official Full Name
transmembrane protein, putative (DUF1191)
Primary source
TAIR:AT4G01140
Locus tag
AT4G01140
See related
Araport:AT4G01140
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F2N1.38; F2N1_38
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Genomic context

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Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (490749..492418, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene G-box binding factor 2 Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene CURVATURE THYLAKOID 1A-like protein Neighboring gene BTB/POZ/Kelch-associated protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_116344.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
transmembrane protein, putative (DUF1191)
NP_192023.1
  • Protein of unknown function (DUF1191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, leaf whorl, root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1191 (InterPro:IPR010605); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1191) (TAIR:AT4G23720.1); Has 115 Blast hits to 115 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    490749..492418 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116344.3 → NP_192023.1  transmembrane protein, putative (DUF1191) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192023.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V3V1, Q9M152
    Conserved Domains (1) summary
    pfam06697
    Location:28 → 291
    DUF1191; Protein of unknown function (DUF1191)
Nucleotide Protein
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