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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828408, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT4G23090
Locus tag
AT4G23090
See related
Araport:AT4G23090
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F7H19.280; F7H19_280
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Genomic context

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Location:
chromosome: 4
Exon count:
6
Sequence:
Chromosome: 4; NC_003075.7 (12100391..12101483, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene IQ-domain 22 Neighboring gene RHOMBOID-like protein 7 Neighboring gene transmembrane protein, putative (DUF239) Neighboring gene glutamate-cysteine ligase Neighboring gene insulin-like growth factor binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001084965.1
NM_118438.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_001078434.1
  • unknown protein; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
NP_194040.2
  • unknown protein; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    12100391..12101483 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001084965.1 → NP_001078434.1  uncharacterized protein AT4G23090 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078434.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0MF93, Q1PE54
    Conserved Domains (1) summary
    cd11378
    Location:64 → 171
    DUF296; Domain of unknown function found in archaea, bacteria, and plants

  2. NM_118438.2 → NP_194040.2  uncharacterized protein AT4G23090 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194040.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8MRQ6, O82758
    Conserved Domains (1) summary
    cd11378
    Location:40 → 152
    DUF296; Domain of unknown function found in archaea, bacteria, and plants
Nucleotide Protein
Heading Accession and Version

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