U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Stigma-specific Stig1 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828795, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
Stigma-specific Stig1 family protein
Primary source
TAIR:AT4G26880
Locus tag
AT4G26880
See related
Araport:AT4G26880
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F10M23.220; F10M23_220
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (13508042..13508813, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Putative pyridoxal phosphate-dependent enzyme, YBL036C type Neighboring gene Class II aminoacyl-tRNA and biotin synthetases superfamily protein Neighboring gene ncRNA Neighboring gene mitogen-activated protein kinase kinase kinase 16

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Stigma-specific Stig1 family protein
NP_194418.1
  • Stigma-specific Stig1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Stigma-specific protein Stig1 (InterPro:IPR006969); BEST Arabidopsis thaliana protein match is: Stigma-specific Stig1 family protein (TAIR:AT5G55110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    13508042..13508813 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118822.2 → NP_194418.1  Stigma-specific Stig1 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194418.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SZ28
    UniProtKB/TrEMBL
    A0A178V306, A0A5S9XX27
    Conserved Domains (1) summary
    pfam04885
    Location:35 → 152
    Stig1; Stigma-specific protein, Stig1
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SZ28.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials
Tools