U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

FGGY family of carbohydrate kinase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829154, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
FGGY family of carbohydrate kinase
Primary source
TAIR:AT4G30310
Locus tag
AT4G30310
See related
Araport:AT4G30310
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F17I23.350; F17I23_350
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 4
Exon count:
14
Sequence:
Chromosome: 4; NC_003075.7 (14831738..14835343)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene xyloglucan endotransglucosylase/hydrolase 19 Neighboring gene non-intrinsic ABC protein 15 Neighboring gene CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein Neighboring gene Small nuclear ribonucleoprotein family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Redox Conformation-Specific Protein-Protein Interactions of the 2-Cysteine Peroxiredoxin in Arabidopsis. Liebthal M, et al. Antioxidants (Basel), 2020 Jun 11. PMID 32545358, Free PMC Article
  2. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
  3. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
  4. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  5. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

NM_119177.5
NM_179142.1
NM_179143.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables phosphotransferase activity, alcohol group as acceptor IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytosol HDA PubMed 
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane HDA PubMed 

General protein information

Go to the top of the page Help
Preferred Names
FGGY family of carbohydrate kinase
NP_194760.2
  • FGGY family of carbohydrate kinase; FUNCTIONS IN: carbohydrate kinase activity, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485), Carbohydrate kinase, FGGY-related (InterPro:IPR006003); Has 16218 Blast hits to 14320 proteins in 2322 species: Archae - 199; Bacteria - 12888; Metazoa - 473; Fungi - 341; Plants - 104; Viruses - 0; Other Eukaryotes - 2213 (source: NCBI BLink).
NP_849473.1
  • FGGY family of carbohydrate kinase; FUNCTIONS IN: carbohydrate kinase activity, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485), Carbohydrate kinase, FGGY-related (InterPro:IPR006003); Has 12553 Blast hits to 11885 proteins in 2113 species: Archae - 169; Bacteria - 10333; Metazoa - 409; Fungi - 243; Plants - 67; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink).
NP_849474.1
  • FGGY family of carbohydrate kinase; FUNCTIONS IN: carbohydrate kinase activity, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485), Carbohydrate kinase, FGGY-related (InterPro:IPR006003); Has 12264 Blast hits to 12262 proteins in 2271 species: Archae - 128; Bacteria - 9718; Metazoa - 437; Fungi - 335; Plants - 71; Viruses - 0; Other Eukaryotes - 1575 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    14831738..14835343
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001342005.1 → NP_001328910.1  FGGY family of carbohydrate kinase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UZT5, A0A1P8B635
    Conserved Domains (1) summary
    cd07782
    Location:1 → 453
    FGGY_YpCarbK_like; Yersinia Pseudotuberculosis carbohydrate kinase-like subgroup; belongs to the FGGY family of carbohydrate kinases

  2. NM_119177.5 → NP_194760.2  FGGY family of carbohydrate kinase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194760.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XZF4, A0A7G2F4Z6, F4JQ90, Q67Y17
    Conserved Domains (1) summary
    cd07782
    Location:15 → 571
    FGGY_YpCarbK_like; Yersinia Pseudotuberculosis carbohydrate kinase-like subgroup; belongs to the FGGY family of carbohydrate kinases

  3. NM_179142.1 → NP_849473.1  FGGY family of carbohydrate kinase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849473.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FU74, F4JQ91, Q9M0C9
    Conserved Domains (1) summary
    cd07782
    Location:15 → 485
    FGGY_YpCarbK_like; Yersinia Pseudotuberculosis carbohydrate kinase-like subgroup; belongs to the FGGY family of carbohydrate kinases

  4. NM_179143.1 → NP_849474.1  FGGY family of carbohydrate kinase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849474.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UZT5, F4JQ92
    Conserved Domains (1) summary
    cd07782
    Location:1 → 443
    FGGY_YpCarbK_like; Yersinia Pseudotuberculosis carbohydrate kinase-like subgroup; belongs to the FGGY family of carbohydrate kinases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.