U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LAC12 laccase 12 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830421, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
LAC12
Official Full Name
laccase 12
Primary source
TAIR:AT5G05390
Locus tag
AT5G05390
See related
Araport:AT5G05390
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
K18I23.20; K18I23_20; laccase 12
Summary
putative laccase, a member of laccase family of genes (17 members in Arabidopsis).
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LAC12 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Sequence:
Chromosome: 5; NC_003076.8 (1594685..1597042)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Heavy metal transport/detoxification superfamily protein Neighboring gene Cytochrome b-c1 complex, subunit 8 protein Neighboring gene prenylated RAB acceptor 1.B3 Neighboring gene LRR and NB-ARC domains-containing disease resistance protein Neighboring gene DRE-binding protein 2A Neighboring gene FKBP-like peptidyl-prolyl cis-trans isomerase family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Involvement of Arabidopsis Multi-Copper Oxidase-Encoding LACCASE12 in Root-to-Shoot Iron Partitioning: A Novel Example of Copper-Iron Crosstalk. Bernal M, et al. Front Plant Sci, 2021. PMID 34707625, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
  
enables hydroquinone:oxygen oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in response to iron ion starvation IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
laccase 12
NP_196158.1
  • laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    1594685..1597042
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120621.2 → NP_196158.1  laccase 12 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196158.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FLB5
    UniProtKB/TrEMBL
    A0A5S9Y1N4, A0A654FYL2, A0A7G2F8J6
    Conserved Domains (1) summary
    TIGR03389
    Location:24 → 565
    laccase; plant
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FLB5.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools