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BED41_RS00555 pyruvate formate lyase family protein [ Cloacibacillus porcorum ]

Gene ID: 83056340, updated on 23-Jul-2024

Summary

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Gene symbol
BED41_RS00555
Gene description
pyruvate formate lyase family protein
Locus tag
BED41_RS00555
Gene type
protein coding
Organism
Cloacibacillus porcorum (strain: CL-84 (T), nat-host: Sus scrofa, culture-collection: DSM:25858, type-material: type strain of Cloacibacillus porcorum)
Lineage
Bacteria; Synergistota; Synergistia; Synergistales; Synergistaceae; Cloacibacillus
Old locus tag
BED41_00555
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Genomic context

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NZ_CP016757.1Genomic Context describing neighboring genes Neighboring gene TRAP transporter large permease Neighboring gene DctP family TRAP transporter solute-binding subunit Neighboring gene glycyl-radical enzyme activating protein Neighboring gene DUF1932 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP016757.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insight into the mechanism of the B12-independent glycerol dehydratase from Clostridium butyricum: preliminary biochemical and structural characterization. O'Brien JR, et al. Biochemistry, 2004 Apr 27. PMID 15096031
  2. Biochemical and genetic characterization of benzylsuccinate synthase from Thauera aromatica: a new glycyl radical enzyme catalysing the first step in anaerobic toluene metabolism. Leuthner B, et al. Mol Microbiol, 1998 May. PMID 9632263
  3. Structure and mechanism of the glycyl radical enzyme pyruvate formate-lyase. Becker A, et al. Nat Struct Biol, 1999 Oct. PMID 10504733
  4. p-Hydroxyphenylacetate decarboxylase from Clostridium difficile. A novel glycyl radical enzyme catalysing the formation of p-cresol. Selmer T, et al. Eur J Biochem, 2001 Mar. PMID 11231288
  5. Microbial conversion of choline to trimethylamine requires a glycyl radical enzyme. Craciun S, et al. Proc Natl Acad Sci U S A, 2012 Dec 26. PMID 23151509, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
pyruvate formate lyase family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP016757.1 Reference assembly

    Range
    125773..128343
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_157102218.1 pyruvate formate lyase family protein [Cloacibacillus porcorum]

    UniProtKB/TrEMBL
    A0A1B2I172
    Conserved Domains (1) summary
    cl38938
    Location:29 → 853
    RNR_PFL; Ribonucleotide reductase and Pyruvate formate lyase

Gene LinkOut

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Molecular Biology Databases