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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830629, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT5G07380
Locus tag
AT5G07380
See related
Araport:AT5G07380
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T2I1.90; T2I1_90
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Genomic context

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Location:
chromosome: 5
Exon count:
13
Sequence:
Chromosome: 5; NC_003076.8 (2332436..2336063)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene TUDOR-SN protein 1 Neighboring gene Amidase family protein Neighboring gene inositol polyphosphate kinase 2 alpha Neighboring gene respiratory burst oxidase homolog A Neighboring gene forkhead-associated domain-containing protein / FHA domain-containing protein Neighboring gene Pectin lyase-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_001036771.2
NM_001085072.2
NM_001342934.1
NM_001342935.1
NM_001342936.1
NM_120820.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_001031848.1
  • unknown protein; Has 84 Blast hits to 81 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
NP_001078541.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell; Has 84 Blast hits to 81 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
NP_196355.2
  • unknown protein; Has 84 Blast hits to 81 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    2332436..2336063
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120820.4 → NP_196355.2  uncharacterized protein AT5G07380 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196355.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178U929, A0A654FZ61, Q5Q0B0

  2. NM_001342934.1 → NP_001332075.1  uncharacterized protein AT5G07380 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178U929, A0A654FZ61, Q5Q0B0

  3. NM_001036771.2 → NP_001031848.1  uncharacterized protein AT5G07380 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031848.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178U929, A0A654FZ61, Q5Q0B0

  4. NM_001342935.1 → NP_001332076.1  uncharacterized protein AT5G07380 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178U929, Q1PDZ3

  5. NM_001085072.2 → NP_001078541.1  uncharacterized protein AT5G07380 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078541.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178U929, Q1PDZ3

  6. NM_001342936.1 → NP_001332074.1  uncharacterized protein AT5G07380 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178U929, A0A1P8BFY2
Nucleotide Protein
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