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TCP17 TCP domain protein 17 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830701, updated on 18-Sep-2024

Summary

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Official Symbol
TCP17
Official Full Name
TCP domain protein 17
Primary source
TAIR:AT5G08070
Locus tag
AT5G08070
See related
Araport:AT5G08070
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T22D6.10; T22D6_10; TCP domain protein 17
Summary
TCP gene involved in heterochronic control of leaf differentiation.
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Genomic context

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See TCP17 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (2584358..2586035)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Defensin-like (DEFL) family protein Neighboring gene furry Neighboring gene tRNA-Ala Neighboring gene syntaxin of plants 132

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A protracted and dynamic maturation schedule underlies Arabidopsis leaf development. Efroni I, et al. Plant Cell, 2008 Sep. PMID 18805992, Free PMC Article
  2. Roles of miR319 and TCP Transcription Factors in Leaf Development. Koyama T, et al. Plant Physiol, 2017 Oct. PMID 28842549, Free PMC Article
  3. The molecular mechanism of sporocyteless/nozzle in controlling Arabidopsis ovule development. Wei B, et al. Cell Res, 2015 Jan. PMID 25378179, Free PMC Article
  4. Analysis of functional redundancies within the Arabidopsis TCP transcription factor family. Danisman S, et al. J Exp Bot, 2013 Dec. PMID 24129704, Free PMC Article
  5. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001342977.1
NM_120889.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within cell differentiation IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within leaf development IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within leaf morphogenesis IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within leaf senescence IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within positive regulation of development, heterochronic IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within regulation of DNA-templated transcription TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
TCP domain protein 17
NP_001318505.1
  • TCP domain protein 17 (TCP17); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 (TAIR:AT5G60970.1); Has 1349 Blast hits to 1349 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1349; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    2584358..2586035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001342977.1 → NP_001318505.1  TCP domain protein 17 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LEZ9
    UniProtKB/TrEMBL
    A0A178UHH9

  2. NM_120889.1 → NP_196424.1  TCP domain protein 17 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196424.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LEZ9
    UniProtKB/TrEMBL
    A0A178UHH9
    Conserved Domains (1) summary
    cl23822
    Location:13 → 124
    TCP; TCP family transcription factor
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LEZ9.1

Gene LinkOut

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