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Thiamine pyrophosphate dependent pyruvate decarboxylase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830867, updated on 18-Sep-2024

Summary

Official Full Name
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
Primary source
TAIR:AT5G01320
Locus tag
AT5G01320
See related
Araport:AT5G01320
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T10O8.30; T10O8_30
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Genomic context

Location:
chromosome: 5
Exon count:
5
Sequence:
Chromosome: 5; NC_003076.8 (129263..131687, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene transcription factor bHLH140-like protein Neighboring gene APRATAXIN-like protein Neighboring gene pyruvate decarboxylase-3 Neighboring gene pseudo

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_120210.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 
enables pyruvate decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
NP_195752.1
  • Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Pyruvate decarboxylase/indolepyruvate decarboxylase (InterPro:IPR012110), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT4G33070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    129263..131687 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120210.3NP_195752.1  Thiamine pyrophosphate dependent pyruvate decarboxylase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195752.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q84W45, Q9M040
    UniProtKB/TrEMBL
    A0A654FX97
    Conserved Domains (4) summary
    cd07038
    Location:45206
    TPP_PYR_PDC_IPDC_like; Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins
    PLN02573
    Location:32603
    PLN02573; pyruvate decarboxylase
    cd02005
    Location:404586
    TPP_PDC_IPDC; Thiamine pyrophosphate (TPP) family, PDC_IPDC subfamily, TPP-binding module; composed of proteins similar to pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC). PDC, a key enzyme in alcoholic fermentation, catalyzes the conversion of ...
    pfam00205
    Location:239356
    TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain