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DGS1 dgd1 suppressor 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831104, updated on 18-Sep-2024

Summary

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Official Symbol
DGS1
Official Full Name
dgd1 suppressor 1
Primary source
TAIR:AT5G12290
Locus tag
AT5G12290
See related
Araport:AT5G12290
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
DGD1 SUPPRESSOR 1
Summary
Encodes a mitochondrial outer membrane protein, involved in galactoglycerolipid biosynthesis. The dgd1 mutant phenotype is suppressed in the dgs1 mutant background.
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Genomic context

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See DGS1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
14
Sequence:
Chromosome: 5; NC_003076.8 (3974119..3978221, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein Neighboring gene Calcium-dependent lipid-binding (CaLB domain) family protein Neighboring gene RING/U-box superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phosphate regulation of lipid biosynthesis in Arabidopsis is independent of the mitochondrial outer membrane DGS1 complex. Moellering ER, et al. Plant Physiol, 2010 Apr. PMID 20181751, Free PMC Article
  2. Mutation of a mitochondrial outer membrane protein affects chloroplast lipid biosynthesis. Xu C, et al. Plant J, 2008 Apr. PMID 18208519
  3. Arabidopsis DGD1 SUPPRESSOR1 Is a Subunit of the Mitochondrial Contact Site and Cristae Organizing System and Affects Mitochondrial Biogenesis. Li L, et al. Plant Cell, 2019 Aug. PMID 31118221, Free PMC Article
  4. Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Heazlewood JL, et al. Plant Cell, 2004 Jan. PMID 14671022, Free PMC Article
  5. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001343232.1
NM_001343233.1
NM_001343234.1
NM_121267.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within galactolipid biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within hydrogen peroxide biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within mitochondrion organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within response to water deprivation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
part_of MICOS complex IPI
Inferred from Physical Interaction
more info
 PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in mitochondrial outer membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrion HDA PubMed 
part_of protein-containing complex IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
dgd1 suppressor 1
NP_568262.2
  • DGD1 SUPPRESSOR 1 (DGS1); INVOLVED IN: galactolipid biosynthetic process, hydrogen peroxide biosynthetic process; LOCATED IN: mitochondrial outer membrane, mitochondrion, protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear control of ATP synthase 2 (InterPro:IPR013946); Has 223 Blast hits to 223 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 125; Plants - 59; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    3974119..3978221 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121267.5 → NP_568262.2  dgd1 suppressor 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568262.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8GUK1, Q8GWL0, Q94CL3
    UniProtKB/TrEMBL
    A0A178UP20, A0A5S9Y5R6
    Conserved Domains (1) summary
    pfam08637
    Location:317 → 592
    NCA2; ATP synthase regulation protein NCA2

  2. NM_001343232.1 → NP_001330601.1  dgd1 suppressor 1 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BBA3
    Conserved Domains (1) summary
    pfam08637
    Location:317 → 520
    NCA2; ATP synthase regulation protein NCA2

  3. NM_001343234.1 → NP_001330600.1  dgd1 suppressor 1 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8GUK1, Q8GWL0, Q94CL3
    UniProtKB/TrEMBL
    A0A178UP20, A0A5S9Y5R6
    Conserved Domains (1) summary
    pfam08637
    Location:317 → 592
    NCA2; ATP synthase regulation protein NCA2

  4. NM_001343233.1 → NP_001330602.1  dgd1 suppressor 1 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BBA3
    Conserved Domains (1) summary
    pfam08637
    Location:317 → 520
    NCA2; ATP synthase regulation protein NCA2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8GUK1.1

Gene LinkOut

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