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WRKY72 WRKY DNA-binding protein 72 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831365, updated on 18-Sep-2024

Summary

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Official Symbol
WRKY72
Official Full Name
WRKY DNA-binding protein 72
Primary source
TAIR:AT5G15130
Locus tag
AT5G15130
See related
Araport:AT5G15130
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 72; ATWRKY72; F8M21.20; F8M21_20; WRKY DNA-binding protein 72
Summary
member of WRKY Transcription Factor; Group II-b; contribute to basal immunity.
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Genomic context

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See WRKY72 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (4904290..4907094)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Pectate lyase family protein Neighboring gene 2-aminoethanethiol dioxygenase, putative (DUF1637) Neighboring gene Galactose mutarotase-like superfamily protein Neighboring gene homeobox 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. WRKY72-type transcription factors contribute to basal immunity in tomato and Arabidopsis as well as gene-for-gene resistance mediated by the tomato R gene Mi-1. Bhattarai KK, et al. Plant J, 2010 Jul. PMID 20409007
  2. The WRKY superfamily of plant transcription factors. Eulgem T, et al. Trends Plant Sci, 2000 May. PMID 10785665
  3. Profiling of the Receptor for Activated C Kinase 1a (RACK1a) interaction network in Arabidopsis thaliana. Guo J, et al. Biochem Biophys Res Commun, 2019 Dec 3. PMID 31606202
  4. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
  5. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001343389.1
NM_121517.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within defense response IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
WRKY DNA-binding protein 72
NP_197017.1
  • WRKY DNA-binding protein 72 (WRKY72); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 61 (TAIR:AT1G18860.1); Has 6758 Blast hits to 4151 proteins in 378 species: Archae - 0; Bacteria - 669; Metazoa - 395; Fungi - 387; Plants - 3478; Viruses - 9; Other Eukaryotes - 1820 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    4904290..4907094
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121517.3 → NP_197017.1  WRKY DNA-binding protein 72 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197017.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8GYQ6, Q9LXG8
    UniProtKB/TrEMBL
    A0A5S9Y4K7
    Conserved Domains (1) summary
    smart00774
    Location:227 → 284
    WRKY; DNA binding domain

  2. NM_001343389.1 → NP_001331284.1  WRKY DNA-binding protein 72 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BDI5, A0A5S9Y4K7, A0A7G2FCP8
    Conserved Domains (1) summary
    smart00774
    Location:185 → 242
    WRKY; DNA binding domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LXG8.1

Gene LinkOut

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