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Pollen Ole e 1 allergen and extensin family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831434, updated on 18-Sep-2024

Summary

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Official Full Name
Pollen Ole e 1 allergen and extensin family protein
Primary source
TAIR:AT5G15780
Locus tag
AT5G15780
See related
Araport:AT5G15780
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14F8.160; F14F8_160
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Genomic context

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Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (5144629..5146458, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Alpha-L RNA-binding motif/Ribosomal protein S4 family protein Neighboring gene Ribosomal protein PSRP-3/Ycf65 Neighboring gene glucose-6-phosphate acetyltransferase 1 Neighboring gene RING/U-box superfamily protein Neighboring gene ncRNA Neighboring gene K-box region and MADS-box transcription factor family protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_121583.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Pollen Ole e 1 allergen and extensin family protein
NP_197082.1
  • Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); Has 85252 Blast hits to 38354 proteins in 1825 species: Archae - 258; Bacteria - 17925; Metazoa - 33727; Fungi - 8101; Plants - 11894; Viruses - 2873; Other Eukaryotes - 10474 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    5144629..5146458 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121583.4 → NP_197082.1  Pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197082.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9Y4R2, Q9LFU8
    Conserved Domains (1) summary
    pfam01190
    Location:42 → 124
    Pollen_Ole_e_I; Pollen proteins Ole e I like
Nucleotide Protein
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