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AT5G17650 glycine/proline-rich protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831631, updated on 15-Feb-2024

Summary

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Gene symbol
AT5G17650
Gene description
glycine/proline-rich protein
Primary source
Araport:AT5G17650
Locus tag
AT5G17650
See related
TAIR:AT5G17650
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
K10A8.130; K10A8_130
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Genomic context

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See AT5G17650 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (5816678..5818472, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Nucleotide/sugar transporter family protein Neighboring gene ncRNA Neighboring gene nuclear factor 1 A-type protein (DUF1005) Neighboring gene tRNA (guanine-N-7) methyltransferase Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene disease resistance protein (TIR-NBS-LRR class) Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714
  2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

GeneRIFs: Gene References Into Functions

General gene information

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NM_121771.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
glycine/proline-rich protein
NP_197267.1
  • glycine/proline-rich protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    5816678..5818472 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121771.3 → NP_197267.1  glycine/proline-rich protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197267.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UL52, Q0WWS8, Q9LF59
Nucleotide Protein
Heading Accession and Version

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