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CXE18 carboxyesterase 18 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832418, updated on 18-Sep-2024

Summary

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Official Symbol
CXE18
Official Full Name
carboxyesterase 18
Primary source
TAIR:AT5G23530
Locus tag
AT5G23530
See related
Araport:AT5G23530
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtCXE18; carboxyesterase 18; MQM1.21; MQM1_21
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Genomic context

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See CXE18 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (7932966..7934547, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene smr (Small MutS Related) domain-containing protein Neighboring gene KOW domain-containing protein Neighboring gene Mov34/MPN/PAD-1 family protein Neighboring gene Got1/Sft2-like vescicle transport protein family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure activity studies with xenobiotic substrates using carboxylesterases isolated from Arabidopsis thaliana. Cummins I, et al. Phytochemistry, 2007 Mar. PMID 17270225
  2. Penetration of the stigma and style elicits a novel transcriptome in pollen tubes, pointing to genes critical for growth in a pistil. Qin Y, et al. PLoS Genet, 2009 Aug. PMID 19714218, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_122260.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables carboxylesterase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables carboxylesterase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within pollen tube growth IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
carboxyesterase 18
NP_197744.1
  • carboxyesterase 18 (CXE18); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    7932966..7934547 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_122260.4 → NP_197744.1  carboxyesterase 18 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197744.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L8W1, Q9LT10
    UniProtKB/TrEMBL
    A0A178UGJ5, A0A7G2FD86
    Conserved Domains (1) summary
    pfam07859
    Location:90 → 307
    Abhydrolase_3; alpha/beta hydrolase fold
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LT10.1

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