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Putative endonuclease or glycosyl hydrolase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 833536, updated on 18-Sep-2024

Summary

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Official Full Name
Putative endonuclease or glycosyl hydrolase
Primary source
TAIR:AT5G35640
Locus tag
AT5G35640
See related
Araport:AT5G35640
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MJE4.10; MJE4_10
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Genomic context

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Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (13834633..13835641)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Eukaryotic initiation factor 4E protein Neighboring gene glutamine synthetase 2 Neighboring gene miscRNA Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables RNA nuclease activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Putative endonuclease or glycosyl hydrolase
NP_198414.2
  • Putative endonuclease or glycosyl hydrolase; BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT1G01355.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    13834633..13835641
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_122955.3 → NP_198414.2  Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_198414.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654G5B8, F4JZX5
    Conserved Domains (1) summary
    cd10910
    Location:34 → 169
    limkain_b1_N_like; N-terminal LabA-like domain of limkain b1 and similar proteins
Nucleotide Protein
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