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iqd33 IQ-domain 33 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 833540, updated on 18-Sep-2024

Summary

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Official Symbol
iqd33
Official Full Name
IQ-domain 33
Primary source
TAIR:AT5G35670
Locus tag
AT5G35670
See related
Araport:AT5G35670
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
IQ-domain 33; MXH1.1; MXH1_1
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Genomic context

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See iqd33 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Sequence:
Chromosome: 5; NC_003076.8 (13855736..13858059)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Glycine-rich protein family Neighboring gene Nucleic acid-binding, OB-fold-like protein Neighboring gene zinc metalloproteinase-like protein Neighboring gene zinc metalloproteinase-like protein Neighboring gene nuclease HARBI1-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Markers

NM_122958.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
IQ-domain 33
NP_568529.1
  • IQ-domain 33 (iqd33); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 3 (TAIR:AT3G52290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    13855736..13858059
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_122958.4 → NP_568529.1  IQ-domain 33 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568529.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L8M9, Q9FKI3
    UniProtKB/TrEMBL
    A0A178U8P3, A0A5S9Y8Q2, A0A654G5U5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8L8M9.1

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