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RBCS2B Ribulose bisphosphate carboxylase (small chain) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 833829, updated on 18-Sep-2024

Summary

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Official Symbol
RBCS2B
Official Full Name
Ribulose bisphosphate carboxylase (small chain) family protein
Primary source
TAIR:AT5G38420
Locus tag
AT5G38420
See related
Araport:AT5G38420
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MXI10.14; MXI10_14; Rubisco small subunit 2B
Summary
Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410).
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Genomic context

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See RBCS2B in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (15380907..15382071, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Ribulose bisphosphate carboxylase (small chain) family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ribulose bisphosphate carboxylase (small chain) family protein Neighboring gene S-protein homologue 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cosuppression of RBCS3B in Arabidopsis leads to severe photoinhibition caused by ROS accumulation. Zhan GM, et al. Plant Cell Rep, 2014 Jul. PMID 24682522
  2. Regulation of Active DNA Demethylation by a Methyl-CpG-Binding Domain Protein in Arabidopsis thaliana. Li Q, et al. PLoS Genet, 2015 May. PMID 25933434, Free PMC Article
  3. A split-ubiquitin yeast two-hybrid screen to examine the substrate specificity of atToc159 and atToc132, two Arabidopsis chloroplast preprotein import receptors. Dutta S, et al. PLoS One, 2014. PMID 24736607, Free PMC Article
  4. High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study. Giacomelli L, et al. Plant Physiol, 2006 Jun. PMID 16648217, Free PMC Article
  5. High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. Giavalisco P, et al. Plant Mol Biol, 2005 Mar. PMID 15821981

See all (18) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_123203.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast HDA PubMed 
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast envelope HDA PubMed 
located_in chloroplast stroma HDA PubMed 
located_in cytosolic ribosome HDA PubMed 
located_in plastid HDA PubMed 
located_in thylakoid HDA PubMed 

General protein information

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Preferred Names
Ribulose bisphosphate carboxylase (small chain) family protein
NP_198658.1
  • Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: in 8 components; EXPRESSED IN: 10 plant structures; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    15380907..15382071 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123203.5 → NP_198658.1  Ribulose bisphosphate carboxylase (small chain) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_198658.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P10797, Q9FF20
    UniProtKB/TrEMBL
    A0A5S9Y907, A0A654G618
    Conserved Domains (3) summary
    PLN02289
    Location:1 → 176
    PLN02289; ribulose-bisphosphate carboxylase small chain
    pfam00101
    Location:67 → 175
    RuBisCO_small; Ribulose bisphosphate carboxylase, small chain
    pfam12338
    Location:2 → 42
    RbcS; Ribulose-1,5-bisphosphate carboxylase small subunit
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P10797.2

Gene LinkOut

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