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UBC33 ubiquitin-conjugating enzyme 33 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835111, updated on 18-Sep-2024

Summary

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Official Symbol
UBC33
Official Full Name
ubiquitin-conjugating enzyme 33
Primary source
TAIR:AT5G50430
Locus tag
AT5G50430
See related
Araport:AT5G50430
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MXI22.15; MXI22_15; ubiquitin-conjugating enzyme 33
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Genomic context

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See UBC33 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
10
Sequence:
Chromosome: 5; NC_003076.8 (20534058..20537138, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene O-fucosyltransferase family protein Neighboring gene Putative membrane lipoprotein Neighboring gene membrin 12 Neighboring gene uncharacterized protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis group XIV ubiquitin-conjugating enzymes AtUBC32, AtUBC33, and AtUBC34 play negative roles in drought stress response. Ahn MY, et al. J Plant Physiol, 2018 Nov. PMID 30193177
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. negative role in drought stress response
    Title: Arabidopsis group XIV ubiquitin-conjugating enzymes AtUBC32, AtUBC33, and AtUBC34 play negative roles in drought stress response.
Submit: New GeneRIF Correction

General gene information

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NM_001036971.2
NM_001036972.2
NM_124425.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables ubiquitin conjugating enzyme activity IEA
Inferred from Electronic Annotation
more info
  
enables ubiquitin-protein transferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to water deprivation IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within negative regulation of stomatal opening IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
colocalizes_with endoplasmic reticulum IPI
Inferred from Physical Interaction
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-conjugating enzyme 33
NP_001032048.2
  • ubiquitin-conjugating enzyme 33 (UBC33); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 34 (TAIR:AT1G17280.2); Has 7796 Blast hits to 7792 proteins in 375 species: Archae - 0; Bacteria - 0; Metazoa - 3402; Fungi - 1652; Plants - 1491; Viruses - 23; Other Eukaryotes - 1228 (source: NCBI BLink).
NP_001032049.1
  • ubiquitin-conjugating enzyme 33 (UBC33); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 34 (TAIR:AT1G17280.2); Has 4226 Blast hits to 4224 proteins in 339 species: Archae - 0; Bacteria - 0; Metazoa - 1846; Fungi - 863; Plants - 833; Viruses - 17; Other Eukaryotes - 667 (source: NCBI BLink).
NP_199854.1
  • ubiquitin-conjugating enzyme 33 (UBC33); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 34 (TAIR:AT1G17280.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    20534058..20537138 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124425.4 → NP_199854.1  ubiquitin-conjugating enzyme 33 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199854.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q2V2Z8, Q4TYX8, Q9FK29
    UniProtKB/TrEMBL
    A0A178UPT5, A0A5S9YD25
    Conserved Domains (2) summary
    COG5078
    Location:1 → 161
    COG5078; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
    cd00195
    Location:7 → 157
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

  2. NM_001036972.2 → NP_001032049.1  ubiquitin-conjugating enzyme 33 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001032049.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UPT5, A0A5S9YD25
    Conserved Domains (2) summary
    COG5078
    Location:1 → 148
    COG5078; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
    cd00195
    Location:7 → 144
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

  3. NM_001036971.2 → NP_001032048.2  ubiquitin-conjugating enzyme 33 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001032048.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q2V2Z8, Q4TYX8, Q9FK29
    UniProtKB/TrEMBL
    A0A178UPT5, A0A5S9YD25
    Conserved Domains (2) summary
    COG5078
    Location:1 → 161
    COG5078; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
    cd00195
    Location:7 → 157
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FK29.1

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