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stress up-regulated Nod 19 protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836304, updated on 18-Sep-2024

Summary

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Official Full Name
stress up-regulated Nod 19 protein
Primary source
TAIR:AT5G61820
Locus tag
AT5G61820
See related
Araport:AT5G61820
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MAC9.6; MAC9_6
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Genomic context

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Location:
chromosome: 5
Exon count:
5
Sequence:
Chromosome: 5; NC_003076.8 (24834300..24836933, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene calnexin 1 Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene Mitochondrial substrate carrier family protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene tRNA-Tyr Neighboring gene Exostosin family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. P1 of turnip mosaic virus interacts with NOD19 for vigorous infection. Bello EO, et al. Front Microbiol, 2023. PMID 37426031, Free PMC Article
  2. An abscisic acid-responsive protein interaction network for sucrose non-fermenting related kinase1 in abiotic stress response. Carianopol CS, et al. Commun Biol, 2020 Mar 26. PMID 32218501, Free PMC Article
  3. A mesoscale abscisic acid hormone interactome reveals a dynamic signaling landscape in Arabidopsis. Lumba S, et al. Dev Cell, 2014 May 12. PMID 24823379
  4. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article
  5. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001345498.1
NM_125576.6

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in plant-type vacuole HDA PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
stress up-regulated Nod 19 protein
NP_200990.2
  • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    24834300..24836933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125576.6 → NP_200990.2  stress up-regulated Nod 19 protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200990.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UNY6, A0A384KNB4, A0A5S9YGE1, Q8RXF7, Q8VZ21
    Conserved Domains (1) summary
    pfam07712
    Location:32 → 417
    SURNod19; Stress up-regulated Nod 19

  2. NM_001345498.1 → NP_001330390.1  stress up-regulated Nod 19 protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UNY6, A0A384KNB4, A0A5S9YGE1, Q8RXF7, Q8VZ21
    Conserved Domains (1) summary
    pfam07712
    Location:32 → 417
    SURNod19; Stress up-regulated Nod 19
Nucleotide Protein
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