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UDP-Glycosyltransferase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836698, updated on 18-Sep-2024

Summary

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Official Full Name
UDP-Glycosyltransferase superfamily protein
Primary source
TAIR:AT5G65685
Locus tag
AT5G65685
See related
Araport:AT5G65685
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 5
Exon count:
15
Sequence:
Chromosome: 5; NC_003076.8 (26273034..26278112, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene phosphoenolpyruvate carboxykinase 2 Neighboring gene Major facilitator superfamily protein Neighboring gene ncRNA Neighboring gene Leucine-rich receptor-like protein kinase family protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. STARCH SYNTHASE5, a Noncanonical Starch Synthase-Like Protein, Promotes Starch Granule Initiation in Arabidopsis. Abt MR, et al. Plant Cell, 2020 Aug. PMID 32471861, Free PMC Article
  2. Identification, subcellular localization and biochemical characterization of water-soluble heteroglycans (SHG) in leaves of Arabidopsis thaliana L.: distinct SHG reside in the cytosol and in the apoplast. Fettke J, et al. Plant J, 2005 Aug. PMID 16098110
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_125966.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (ADP-glucose donor) activity TAS
Traceable Author Statement
more info
 PubMed 
enables carbohydrate binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in starch biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within starch granule initiation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast IDA
Inferred from Direct Assay
more info
 PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
UDP-Glycosyltransferase superfamily protein
NP_001190623.1
  • UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: starch synthase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Starch synthase, catalytic domain (InterPro:IPR013534); BEST Arabidopsis thaliana protein match is: starch synthase 4 (TAIR:AT4G18240.1).
NP_569018.1
  • UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: starch synthase activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Starch synthase, catalytic domain (InterPro:IPR013534); BEST Arabidopsis thaliana protein match is: starch synthase 4 (TAIR:AT4G18240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    26273034..26278112 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001345711.1 → NP_001329960.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178URY0, A0A1P8B9B0, A0A384KM79, A0A5S9YHD7, Q94A19
    Conserved Domains (1) summary
    PLN02939
    Location:22 → 351
    PLN02939; transferase, transferring glycosyl groups

  2. NM_001345709.1 → NP_001329962.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B9B9, A0A5S9YHD7, Q94A19

  3. NM_001345710.1 → NP_001329958.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178URY0, A0A1P8B9B0, A0A384KM79, A0A5S9YHD7, Q94A19
    Conserved Domains (1) summary
    PLN02939
    Location:22 → 351
    PLN02939; transferase, transferring glycosyl groups

  4. NM_001345708.1 → NP_001329961.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178URY0, A0A1P8B9B0, A0A384KM79, A0A5S9YHD7, Q94A19
    Conserved Domains (1) summary
    PLN02939
    Location:22 → 351
    PLN02939; transferase, transferring glycosyl groups

  5. NM_001345707.1 → NP_001329959.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178URY0, A0A1P8B9B0, A0A384KM79, A0A5S9YHD7, Q94A19
    Conserved Domains (1) summary
    PLN02939
    Location:22 → 351
    PLN02939; transferase, transferring glycosyl groups

  6. NM_001345713.1 → NP_001329964.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178URY0, A0A1P8B9B0, A0A384KM79, A0A5S9YHD7, Q94A19
    Conserved Domains (1) summary
    PLN02939
    Location:22 → 351
    PLN02939; transferase, transferring glycosyl groups

  7. NM_001345712.1 → NP_001329963.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178URY0, A0A1P8B9B0, A0A384KM79, A0A5S9YHD7, Q94A19
    Conserved Domains (1) summary
    PLN02939
    Location:22 → 351
    PLN02939; transferase, transferring glycosyl groups

  8. NM_001345705.1 → NP_001329957.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B9A6, A0A5S9YHD7, Q94A19
    Conserved Domains (1) summary
    PLN02939
    Location:82 → 468
    PLN02939; transferase, transferring glycosyl groups

  9. NM_001345704.1 → NP_001329965.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178URY0, A0A1P8B9B0, A0A384KM79, A0A5S9YHD7, Q94A19
    Conserved Domains (1) summary
    PLN02939
    Location:22 → 351
    PLN02939; transferase, transferring glycosyl groups

  10. NM_001345706.1 → NP_001329966.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B9C8, A0A654GEF0

  11. NM_001203694.1 → NP_001190623.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190623.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9YHD7, F4JXI7, Q94A19
    Conserved Domains (1) summary
    cl10013
    Location:181 → 420
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...

  12. NM_125966.4 → NP_569018.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_569018.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9YHD7, Q8GWC5, Q94A19
    Conserved Domains (1) summary
    cl10013
    Location:192 → 431
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein
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