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LBD37 LOB domain-containing protein 37 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836878, updated on 18-Sep-2024

Summary

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Official Symbol
LBD37
Official Full Name
LOB domain-containing protein 37
Primary source
TAIR:AT5G67420
Locus tag
AT5G67420
See related
Araport:AT5G67420
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ASL39; ASYMMETRIC LEAVES2-LIKE 39; K8K14.16; K8K14_16; LOB domain-containing protein 37
Summary
Encodes a LOB-domain protein involved in nitrogen metabolism and affecting leaf morphogenesis.
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Genomic context

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See LBD37 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (26903866..26906524, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene root hair specific 19 Neighboring gene transcriptional regulator of RNA polII, SAGA, subunit Neighboring gene GRAS family transcription factor Neighboring gene ncRNA Neighboring gene Acyl-CoA N-acyltransferases (NAT) superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Metabolomic screening applied to rice FOX Arabidopsis lines leads to the identification of a gene-changing nitrogen metabolism. Albinsky D, et al. Mol Plant, 2010 Jan. PMID 20085895
  2. ZmMS1/ZmLBD30-orchestrated transcriptional regulatory networks precisely control pollen exine development. Hou Q, et al. Mol Plant, 2023 Aug 7. PMID 37501369
  3. The TOPLESS interactome: a framework for gene repression in Arabidopsis. Causier B, et al. Plant Physiol, 2012 Jan. PMID 22065421, Free PMC Article
  4. Transcriptional regulation of nitrogen-associated metabolism and growth. Gaudinier A, et al. Nature, 2018 Nov. PMID 30356219
  5. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001345828.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables transcription cis-regulatory region binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within simple leaf morphogenesis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
LOB domain-containing protein 37
NP_001318897.1
  • LOB domain-containing protein 37 (LBD37); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 38 (TAIR:AT3G49940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    26903866..26906524 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126142.5 → NP_201543.1  LOB domain-containing protein 37 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201543.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B7XG93, Q2HIV4, Q8LA66, Q9FN11
    UniProtKB/TrEMBL
    A0A178UGV8, A0A5S9YID1
    Conserved Domains (1) summary
    pfam03195
    Location:2 → 102
    LOB; Lateral organ boundaries (LOB) domain

  2. NM_001345828.1 → NP_001318897.1  LOB domain-containing protein 37 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B7XG93, Q2HIV4, Q8LA66, Q9FN11
    UniProtKB/TrEMBL
    A0A178UGV8, A0A5S9YID1
    Conserved Domains (1) summary
    pfam03195
    Location:2 → 102
    LOB; Lateral organ boundaries (LOB) domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FN11.1

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