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FH6 formin homolog 6 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836883, updated on 18-Sep-2024

Summary

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Official Symbol
FH6
Official Full Name
formin homolog 6
Primary source
TAIR:AT5G67470
Locus tag
AT5G67470
See related
Araport:AT5G67470
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS FORMIN HOMOLOG 6; ATFH6; formin homolog 6; K9I9.3; K9I9_3
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Genomic context

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See FH6 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (26926551..26930556)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene zinc-finger protein 1 Neighboring gene O-Glycosyl hydrolases family 17 protein Neighboring gene tRNA-Met Neighboring gene BTB and TAZ domain protein 4 Neighboring gene ncRNA Neighboring gene succinate dehydrogenase assembly factor Neighboring gene voltage dependent anion channel 2 Neighboring gene Translation protein SH3-like family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Formin homology 2 domains occur in multiple contexts in angiosperms. Cvrcková F, et al. BMC Genomics, 2004 Jul 15. PMID 15256004, Free PMC Article
  2. Formins: intermediates in signal-transduction cascades that affect cytoskeletal reorganization. Deeks MJ, et al. Trends Plant Sci, 2002 Nov. PMID 12417149
  3. Molecular dissection of plant cytokinesis and phragmoplast structure: a survey of GFP-tagged proteins. Van Damme D, et al. Plant J, 2004 Nov. PMID 15469496
  4. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
  5. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_126147.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables actin binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in actin nucleation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
located_in nucleolus HDA PubMed 
located_in nucleus HDA PubMed 
located_in phragmoplast HDA PubMed 
located_in plant-type cell wall HDA PubMed 
located_in spindle HDA PubMed 

General protein information

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Preferred Names
formin homolog 6
NP_201548.1
  • formin homolog 6 (FH6); FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homology 1 (TAIR:AT3G25500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    26926551..26930556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126147.4 → NP_201548.1  formin homolog 6 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201548.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FJX6
    UniProtKB/TrEMBL
    A0A5S9YHW7, A0A7G2FJJ5
    Conserved Domains (1) summary
    pfam02181
    Location:452 → 842
    FH2; Formin Homology 2 Domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FJX6.1

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