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Plk2 polo-like kinase 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 83722, updated on 2-Nov-2024

Summary

Official Symbol
Plk2provided by RGD
Official Full Name
polo-like kinase 2provided by RGD
Primary source
RGD:620760
See related
EnsemblRapid:ENSRNOG00000011951 AllianceGenome:RGD:620760
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Snk
Summary
Enables clathrin heavy chain binding activity; enzyme binding activity; and protein serine/threonine kinase activity. Involved in several processes, including modulation of chemical synaptic transmission; negative regulation of protein localization to cell surface; and small GTPase-mediated signal transduction. Located in dendrite. Is active in postsynapse. Orthologous to human PLK2 (polo like kinase 2). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Brain (RPKM 389.0), Liver (RPKM 239.2) and 9 other tissues See more
Orthologs
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Genomic context

See Plk2 in Genome Data Viewer
Location:
2q14
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (43702536..43708305)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (41969176..41974945)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (41911143..41916901)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene RAB3C, member RAS oncogene family Neighboring gene Grb2-binding adaptor protein, transmembrane Neighboring gene solute carrier family 25 member 5, pseudogene 7 Neighboring gene uncharacterized LOC134485834

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables ATP-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 
enables ATP-dependent protein binding ISO
Inferred from Sequence Orthology
more info
 
enables ATPase binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables GTPase binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables clathrin heavy chain binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein kinase binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein serine kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein serine/threonine kinase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein serine/threonine kinase activity ISO
Inferred from Sequence Orthology
more info
 
enables protein-containing complex binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in G1/S transition of mitotic cell cycle IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in G1/S transition of mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 
involved_in G1/S transition of mitotic cell cycle ISO
Inferred from Sequence Orthology
more info
 
involved_in G1/S transition of mitotic cell cycle ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in Rap protein signal transduction IDA
Inferred from Direct Assay
more info
PubMed 
involved_in Ras protein signal transduction IDA
Inferred from Direct Assay
more info
PubMed 
involved_in long-term synaptic depression IDA
Inferred from Direct Assay
more info
PubMed 
involved_in long-term synaptic potentiation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in memory IEA
Inferred from Electronic Annotation
more info
 
involved_in memory ISO
Inferred from Sequence Orthology
more info
 
involved_in memory ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within mitotic cell cycle ISO
Inferred from Sequence Orthology
more info
 
involved_in mitotic spindle organization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in mitotic spindle organization IEA
Inferred from Electronic Annotation
more info
 
involved_in mitotic spindle organization ISO
Inferred from Sequence Orthology
more info
 
involved_in mitotic spindle organization ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in negative regulation of angiogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of angiogenesis ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within negative regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of apoptotic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in negative regulation of apoptotic process in bone marrow cell IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of apoptotic process in bone marrow cell ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of cellular senescence IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of cellular senescence ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of dendritic spine development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of excitatory postsynaptic potential IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of protein localization to cell surface IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 
involved_in peptidyl-serine phosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of autophagy ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of canonical NF-kappaB signal transduction ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in positive regulation of cell migration involved in sprouting angiogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of cell migration involved in sprouting angiogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of protein catabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of protein catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of receptor internalization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein phosphorylation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in protein phosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of centriole replication IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of centriole replication ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of centriole replication ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in regulation of synaptic plasticity IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of synaptic plasticity IDA
Inferred from Direct Assay
more info
PubMed 
involved_in regulation of synaptic plasticity IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of synaptic plasticity IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of synaptic plasticity ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of synaptic plasticity TAS
Traceable Author Statement
more info
PubMed 
involved_in regulation protein catabolic process at postsynapse IDA
Inferred from Direct Assay
more info
PubMed 
involved_in regulation protein catabolic process at postsynapse IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in regulation protein catabolic process at postsynapse IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in centriole IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in centriole IEA
Inferred from Electronic Annotation
more info
 
located_in centriole ISO
Inferred from Sequence Orthology
more info
 
located_in centriole ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in centrosome IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 
located_in centrosome ISO
Inferred from Sequence Orthology
more info
 
located_in centrosome ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in chromatin IEA
Inferred from Electronic Annotation
more info
 
located_in chromatin ISO
Inferred from Sequence Orthology
more info
 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in dendrite IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in kinetochore IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in postsynapse IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in postsynapse IMP
Inferred from Mutant Phenotype
more info
PubMed 
is_active_in spindle pole IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
serine/threonine-protein kinase PLK2
Names
PLK-2
polo-like kinase 1
serine/threonine-protein kinase SNK
serum-inducible kinase
NP_114009.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_031821.2NP_114009.1  serine/threonine-protein kinase PLK2

    See identical proteins and their annotated locations for NP_114009.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000002
    UniProtKB/Swiss-Prot
    Q9R012
    UniProtKB/TrEMBL
    A0A8I6ADU0, A6I5M4
    Related
    ENSRNOP00000016768.3, ENSRNOT00000016768.6
    Conserved Domains (3) summary
    cd13117
    Location:598679
    POLO_box_2; Second polo-box domain (PBD) of polo-like kinases Plk1, Plk2, Plk3, and Plk5
    cd13118
    Location:500585
    POLO_box_1; First polo-box domain (PBD) of polo-like kinases Plk1, Plk2, Plk3, and Plk5
    cd14188
    Location:77331
    STKc_PLK2; Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 2

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    43702536..43708305
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)