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ALB1 ALBINA 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837374, updated on 18-Sep-2024

Summary

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Official Symbol
ALB1
Official Full Name
ALBINA 1
Primary source
TAIR:AT1G08520
Locus tag
AT1G08520
See related
Araport:AT1G08520
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ALB-1V; ALBINA 1; CHLD; PDE166; PIGMENT DEFECTIVE EMBRYO 166; T27G7.20; T27G7_20; V157
Summary
Encodes the CHLD subunit of the Mg-chelatase enzyme involved in chlorophyll biosynthesis. Lines carrying recessive mutations of this locus are white and seedling lethal.
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Genomic context

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See ALB1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Sequence:
Chromosome: 1; NC_003070.9 (2696381..2701022)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene early nodulin-like protein 18 Neighboring gene fatty acyl-ACP thioesterases B Neighboring gene chitinase-like protein Neighboring gene RNApolymerase sigma subunit 2 Neighboring gene non-photochemical quenching 1 Neighboring gene syntaxin of plants 111

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mg-chelatase of tobacco: identification of a Chl D cDNA sequence encoding a third subunit, analysis of the interaction of the three subunits with the yeast two-hybrid system, and reconstitution of the enzyme activity by co-expression of recombinant CHL D, CHL H and CHL I. Papenbrock J, et al. Plant J, 1997 Nov. PMID 9418040
  2. An Arabidopsis mutant that is resistant to the protoporphyrinogen oxidase inhibitor acifluorfen shows regulatory changes in tetrapyrrole biosynthesis. Soldatova O, et al. Mol Genet Genomics, 2005 Jun. PMID 15815918
  3. Identification and dynamics of Arabidopsis adaptor protein-2 complex and its involvement in floral organ development. Yamaoka S, et al. Plant Cell, 2013 Aug. PMID 23975897, Free PMC Article
  4. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
  5. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_100725.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables magnesium chelatase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in chlorophyll biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within chlorophyll biosynthetic process TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast stroma HDA PubMed 
located_in chloroplast thylakoid HDA PubMed 
located_in extracellular region HDA PubMed 
part_of magnesium chelatase complex TAS
Traceable Author Statement
more info
 PubMed 

General protein information

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Preferred Names
ALBINA 1
NP_563821.2
  • ALBINA 1 (ALB1); FUNCTIONS IN: magnesium chelatase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: magnesium chelatase complex, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Magnesium chelatase, ChlI subunit (InterPro:IPR000523), Magnesium chelatase, ATPase subunit D (InterPro:IPR011776), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G18480.1); Has 11508 Blast hits to 8193 proteins in 1580 species: Archae - 212; Bacteria - 4110; Metazoa - 3314; Fungi - 479; Plants - 476; Viruses - 191; Other Eukaryotes - 2726 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    2696381..2701022
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100725.4 → NP_563821.2  ALBINA 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_563821.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B9DFK0, Q8GUL4, Q8VZU7, Q93YN7, Q9SJE1, Q9SWY5
    UniProtKB/TrEMBL
    A0A178W355, A0A5S9TBL7
    Conserved Domains (1) summary
    TIGR02031
    Location:92 → 747
    BchD-ChlD; magnesium chelatase ATPase subunit D
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SJE1.3

Gene LinkOut

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