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SK41 shaggy-like protein kinase 41 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837516, updated on 15-Oct-2023

Summary

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Gene symbol
SK41
Gene description
shaggy-like protein kinase 41
Primary source
Araport:AT1G09840
Locus tag
AT1G09840
See related
TAIR:AT1G09840
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtHIR1; ATSK41; F21M12.23; F21M12_23; HIR1; hypersensitive induced reaction 1; shaggy-like protein kinase 41
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Genomic context

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See SK41 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Sequence:
Chromosome: 1; NC_003070.9 (3195719..3200403, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Pentatricopeptide repeat (PPR-like) superfamily protein Neighboring gene Glycinamide ribonucleotide (GAR) synthetase Neighboring gene ncRNA Neighboring gene xylem bark cysteine peptidase 3 Neighboring gene ncRNA Neighboring gene purine permease 16

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Physical association of Arabidopsis hypersensitive induced reaction proteins (HIRs) with the immune receptor RPS2. Qi Y, et al. J Biol Chem, 2011 Sep 9. PMID 21757708, Free PMC Article
  2. Differential binding of calmodulin-related proteins to their targets revealed through high-density Arabidopsis protein microarrays. Popescu SC, et al. Proc Natl Acad Sci U S A, 2007 Mar 13. PMID 17360592, Free PMC Article
  3. A membrane protein/signaling protein interaction network for Arabidopsis version AMPv2. Lalonde S, et al. Front Physiol, 2010. PMID 21423366, Free PMC Article
  4. Identification of ubiquitinated proteins in Arabidopsis. Manzano C, et al. Plant Mol Biol, 2008 Sep. PMID 18535787
  5. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001035936.1
NM_001084029.2
NM_001084030.2
NM_001331855.1
NM_001331856.1
NM_001331857.1
NM_001331858.1
NM_100858.5
NM_179296.1
NM_202072.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
shaggy-like protein kinase 41
NP_001077498.1
  • shaggy-like protein kinase 41 (SK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 42 (TAIR:AT1G57870.2); Has 102931 Blast hits to 101896 proteins in 3684 species: Archae - 93; Bacteria - 10743; Metazoa - 37496; Fungi - 11700; Plants - 24573; Viruses - 362; Other Eukaryotes - 17964 (source: NCBI BLink).
NP_001077499.1
  • shaggy-like protein kinase 41 (SK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 42 (TAIR:AT1G57870.2); Has 102931 Blast hits to 101896 proteins in 3684 species: Archae - 93; Bacteria - 10743; Metazoa - 37496; Fungi - 11700; Plants - 24573; Viruses - 362; Other Eukaryotes - 17964 (source: NCBI BLink).
NP_001318967.1
  • shaggy-like protein kinase 41 (SK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 42 (TAIR:AT1G57870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_172455.1
  • shaggy-like protein kinase 41 (SK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 42 (TAIR:AT1G57870.2); Has 102931 Blast hits to 101896 proteins in 3684 species: Archae - 93; Bacteria - 10743; Metazoa - 37496; Fungi - 11700; Plants - 24573; Viruses - 362; Other Eukaryotes - 17964 (source: NCBI BLink).
NP_849627.1
  • shaggy-like protein kinase 41 (SK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 42 (TAIR:AT1G57870.2); Has 103041 Blast hits to 102006 proteins in 3707 species: Archae - 93; Bacteria - 10783; Metazoa - 37541; Fungi - 11720; Plants - 24577; Viruses - 363; Other Eukaryotes - 17964 (source: NCBI BLink).
NP_973801.1
  • shaggy-like protein kinase 41 (SK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 42 (TAIR:AT1G57870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    3195719..3200403 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001331859.1 → NP_001322593.1  shaggy-like protein kinase 41 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04506, Q39019, Q96244
    UniProtKB/TrEMBL
    A0A178WFU0, A0A5S9TJS3
    Conserved Domains (1) summary
    cd14137
    Location:78 → 370
    STKc_GSK3; The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3

  2. NM_001331857.1 → NP_001318967.1  shaggy-like protein kinase 41 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04506, Q39019, Q96244
    UniProtKB/TrEMBL
    A0A178WFU0, A0A5S9TJS3
    Conserved Domains (1) summary
    cd14137
    Location:78 → 370
    STKc_GSK3; The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3

  3. NM_100858.5 → NP_172455.1  shaggy-like protein kinase 41 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172455.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04506, Q39019, Q96244
    UniProtKB/TrEMBL
    A0A178WFU0, A0A5S9TJS3
    Conserved Domains (1) summary
    cd14137
    Location:78 → 370
    STKc_GSK3; The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3

  4. NM_001331858.1 → NP_001322592.1  shaggy-like protein kinase 41 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04506, Q39019, Q96244
    UniProtKB/TrEMBL
    A0A178WFU0, A0A5S9TJS3
    Conserved Domains (1) summary
    cd14137
    Location:78 → 370
    STKc_GSK3; The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3

  5. NM_202072.2 → NP_973801.1  shaggy-like protein kinase 41 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973801.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04506, Q39019, Q96244
    UniProtKB/TrEMBL
    A0A178WFU0, A0A5S9TJS3
    Conserved Domains (1) summary
    cd14137
    Location:78 → 370
    STKc_GSK3; The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3

  6. NM_001035936.1 → NP_001031013.1  shaggy-like protein kinase 41 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031013.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04506, Q39019, Q96244
    UniProtKB/TrEMBL
    A0A178WFU0, A0A5S9TJS3
    Conserved Domains (1) summary
    cd14137
    Location:78 → 370
    STKc_GSK3; The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3

  7. NM_179296.1 → NP_849627.1  shaggy-like protein kinase 41 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849627.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04506, Q39019, Q96244
    UniProtKB/TrEMBL
    A0A178WFU0, A0A5S9TJS3
    Conserved Domains (1) summary
    cd14137
    Location:78 → 370
    STKc_GSK3; The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3

  8. NM_001331855.1 → NP_001322595.1  shaggy-like protein kinase 41 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04506, Q39019, Q96244
    UniProtKB/TrEMBL
    A0A178WFU0, A0A5S9TJS3
    Conserved Domains (1) summary
    cd14137
    Location:78 → 370
    STKc_GSK3; The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3

  9. NM_001084030.2 → NP_001077499.1  shaggy-like protein kinase 41 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077499.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04506, Q39019, Q96244
    UniProtKB/TrEMBL
    A0A178WFU0, A0A5S9TJS3
    Conserved Domains (1) summary
    cd14137
    Location:78 → 370
    STKc_GSK3; The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3

  10. NM_001084029.2 → NP_001077498.1  shaggy-like protein kinase 41 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077498.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04506, Q39019, Q96244
    UniProtKB/TrEMBL
    A0A178WFU0, A0A5S9TJS3
    Conserved Domains (1) summary
    cd14137
    Location:78 → 370
    STKc_GSK3; The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3

  11. NM_001331856.1 → NP_001322594.1  shaggy-like protein kinase 41 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AUK7
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q39019.2

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