ATPC2 ATPase, F1 complex, gamma subunit protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: ATPC2
Official Full Name: ATPase, F1 complex, gamma subunit protein
Primary source: TAIR:AT1G15700
Locus tag: AT1G15700
See related: Araport:AT1G15700
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: F7H2.4; F7H2_4
Summary: One of two genes that encode the gamma subunit of Arabidopsis chloroplast ATP synthase. It is thought to be involved in the regulation of the ATP synthase activity.
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Genomic context

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See ATPC2 in Genome Data Viewer

Location:: chromosome: 1

Exon count:: 1

Sequence:: Chromosome: 1; NC_003070.9 (5402569..5403818, complement)

Chromosome 1 - NC_003070.9 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

ATPC2 shows equal activity in light & dark (roots). Redox potential for its thiol/disulphide transition is higher than that of ATPC1. In nonphotosynthetic plastids, it maintains a sufficient transthylakoid proton gradient for protein translocation.
Title: Thioredoxin-insensitive plastid ATP synthase that performs moonlighting functions.

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Pathways from PubChem

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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NM_101438.2

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables enzyme regulator activity	TAS Traceable Author Statement more info	PubMed
contributes_to proton-transporting ATP synthase activity, rotational mechanism	IMP Inferred from Mutant Phenotype more info	PubMed

Process	Evidence Code	Pubs
acts_upstream_of_or_within proton motive force-driven ATP synthesis	TAS Traceable Author Statement more info	PubMed
acts_upstream_of_or_within regulation of root morphogenesis	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in chloroplast	IDA Inferred from Direct Assay more info	PubMed
located_in chloroplast	ISM Inferred from Sequence Model more info
part_of proton-transporting ATP synthase complex	TAS Traceable Author Statement more info	PubMed

General protein information

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Preferred Names: ATPase, F1 complex, gamma subunit protein

NP_173022.1

ATPC2; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: chloroplast ATP synthase complex, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT4G04640.1); Has 9547 Blast hits to 9544 proteins in 2715 species: Archae - 5; Bacteria - 5540; Metazoa - 280; Fungi - 148; Plants - 177; Viruses - 0; Other Eukaryotes - 3397 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003070.9 Reference assembly

Range

5402569..5403818 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_101438.2 → NP_173022.1 ATPase, F1 complex, gamma subunit protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_173022.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q01909

UniProtKB/TrEMBL

A0A178WD21, A0A5S9UJN2

Conserved Domains (1) summary

pfam00231
Location:64 → 383

ATP-synt; ATP synthase