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ATCHX1 Cation/hydrogen exchanger family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838208, updated on 18-Sep-2024

Summary

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Official Symbol
ATCHX1
Official Full Name
Cation/hydrogen exchanger family protein
Primary source
TAIR:AT1G16380
Locus tag
AT1G16380
See related
Araport:AT1G16380
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
CATION EXCHANGER 1; CHX1; F3O9.18; F3O9_18
Summary
member of Putative Na+/H+ antiporter family
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Genomic context

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See ATCHX1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (5598411..5601367, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Aldolase superfamily protein Neighboring gene Aldolase-type TIM barrel family protein Neighboring gene LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein Neighboring gene organic cation/carnitine transporter 6 Neighboring gene organic cation/carnitine transporter 3 Neighboring gene cytochrome P450, family 79, subfamily F, polypeptide 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables sodium:proton antiporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Cation/hydrogen exchanger family protein
NP_173088.1
  • ATCHX1; FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 2 (TAIR:AT1G79400.1); Has 3057 Blast hits to 3030 proteins in 956 species: Archae - 198; Bacteria - 2123; Metazoa - 0; Fungi - 129; Plants - 509; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    5598411..5601367 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101504.2 → NP_173088.1  Cation/hydrogen exchanger family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173088.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SA37
    UniProtKB/TrEMBL
    A0A178WFC6
    Conserved Domains (1) summary
    PLN03159
    Location:16 → 775
    PLN03159; cation/H(+) antiporter 15; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SA37.1

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