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CYP79F2 cytochrome P450, family 79, subfamily F, polypeptide 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838210, updated on 18-Sep-2024

Summary

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Official Symbol
CYP79F2
Official Full Name
cytochrome P450, family 79, subfamily F, polypeptide 2
Primary source
TAIR:AT1G16400
Locus tag
AT1G16400
See related
Araport:AT1G16400
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
''cytochrome P450; cytochrome P450; CYTOCHROME P450 79F2; F3O9.20; F3O9_20; family 79; polypeptide 2; polypeptide 2''; subfamily F
Summary
Encodes cytochrome P450 CYP79F2.
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Genomic context

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See CYP79F2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (5605044..5607498)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene organic cation/carnitine transporter 6 Neighboring gene Cation/hydrogen exchanger family protein Neighboring gene organic cation/carnitine transporter 3 Neighboring gene cytochrome p450 79f1 Neighboring gene metacaspase 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. CYP79F1 and CYP79F2 have distinct functions in the biosynthesis of aliphatic glucosinolates in Arabidopsis. Chen S, et al. Plant J, 2003 Mar. PMID 12609033
  2. Bus, a bushy Arabidopsis CYP79F1 knockout mutant with abolished synthesis of short-chain aliphatic glucosinolates. Reintanz B, et al. Plant Cell, 2001 Feb. PMID 11226190, Free PMC Article
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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NM_101506.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
  
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within glucosinolate biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
cytochrome P450, family 79, subfamily F, polypeptide 2
NP_563995.2
  • ''cytochrome P450, family 79, subfamily F, polypeptide 2'' (CYP79F2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome p450 79f1 (TAIR:AT1G16410.1); Has 27578 Blast hits to 27450 proteins in 1508 species: Archae - 44; Bacteria - 2254; Metazoa - 10521; Fungi - 5390; Plants - 8520; Viruses - 3; Other Eukaryotes - 846 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    5605044..5607498
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101506.3 → NP_563995.2  cytochrome P450, family 79, subfamily F, polypeptide 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_563995.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q94JZ4, Q9FUY7, Q9SA39
    UniProtKB/TrEMBL
    A0A178WH40
    Conserved Domains (1) summary
    PLN03018
    Location:4 → 537
    PLN03018; homomethionine N-hydroxylase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FUY7.2

Gene LinkOut

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