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TET16 tetraspanin [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838432, updated on 18-Sep-2024

Summary

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Official Symbol
TET16
Official Full Name
tetraspanin
Primary source
TAIR:AT1G18510
Locus tag
AT1G18510
See related
Araport:AT1G18510
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F15H18.2; F15H18_2; tetraspanin 16
Summary
Member of TETRASPANIN family
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Genomic context

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See TET16 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (6373265..6374090)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene 2-aminoethanethiol dioxygenase, putative (DUF1637) Neighboring gene methylthioalkylmalate synthase-like 4 Neighboring gene tetraspanin11 Neighboring gene EF hand calcium-binding protein family Neighboring gene Ribosomal protein L6 family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_101709.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in auxin-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
tetraspanin
NP_173286.2
  • tetraspanin 16 (TET16); BEST Arabidopsis thaliana protein match is: tetraspanin 17 (TAIR:AT1G74045.1); Has 136 Blast hits to 136 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    6373265..6374090
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101709.2 → NP_173286.2  tetraspanin [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4IC96, Q5BQ04, Q5Q0G5, Q9LPR5
    UniProtKB/TrEMBL
    A0A5S9V1R6, A0A654EC07
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5BQ04.1

Gene LinkOut

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