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YUC3 YUCCA 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839474, updated on 18-Sep-2024

Summary

Official Symbol
YUC3
Official Full Name
YUCCA 3
Primary source
TAIR:AT1G04610
Locus tag
AT1G04610
See related
Araport:AT1G04610
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T1G11.14; T1G11_14; YUCCA 3
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Genomic context

See YUC3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (1279351..1281618)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene PPR containing-like protein Neighboring gene myosin XI A Neighboring gene coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family Neighboring gene Polynucleotidyl transferase, ribonuclease H-like superfamily protein Neighboring gene GRIM-19 protein

General gene information

NM_100340.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables N,N-dimethylaniline monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 
enables NADP binding IEA
Inferred from Electronic Annotation
more info
 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables indole-3-pyruvate monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in auxin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within auxin biosynthetic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within response to ethylene IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
YUCCA 3
NP_171955.1
  • YUCCA 3 (YUC3); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: YUCCA 7 (TAIR:AT2G33230.1); Has 9657 Blast hits to 9637 proteins in 1196 species: Archae - 33; Bacteria - 4899; Metazoa - 784; Fungi - 1494; Plants - 670; Viruses - 0; Other Eukaryotes - 1777 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    1279351..1281618
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100340.4NP_171955.1  YUCCA 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_171955.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O23024
    UniProtKB/TrEMBL
    A0A178WNT4, A0A5S9SKR9
    Conserved Domains (1) summary
    COG2072
    Location:38413
    CzcO; Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism]