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AT1G02160 Cox19 family protein (CHCH motif) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839554, updated on 7-Sep-2023

Summary

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Gene symbol
AT1G02160
Gene description
Cox19 family protein (CHCH motif)
Primary source
Araport:AT1G02160
Locus tag
AT1G02160
See related
TAIR:AT1G02160
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T6A9.18
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Genomic context

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See AT1G02160 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (410744..411632)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene homolog of asparagine-linked glycosylation 12 Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene metacaspase 1 Neighboring gene ferredoxin-like protein Neighboring gene Fatty acid hydroxylase superfamily

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001083980.2
NM_100096.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Cox19 family protein (CHCH motif)
NP_001077449.1
  • Cox19 family protein (CHCH motif); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MTCP1 (InterPro:IPR009069), CHCH (InterPro:IPR010625); Has 36 Blast hits to 36 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 19; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
NP_171718.1
  • Cox19 family protein (CHCH motif); CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); Has 56 Blast hits to 56 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 34; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    410744..411632
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100096.4 → NP_171718.1  Cox19 family protein (CHCH motif) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_171718.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654E7G7, Q8VZ44
    Conserved Domains (1) summary
    pfam06747
    Location:21 → 55
    CHCH; CHCH domain

  2. NM_001083980.2 → NP_001077449.1  Cox19 family protein (CHCH motif) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077449.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8MQS6
    Conserved Domains (1) summary
    pfam06747
    Location:21 → 55
    CHCH; CHCH domain
Nucleotide Protein
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