U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

O-fucosyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839795, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
O-fucosyltransferase family protein
Primary source
TAIR:AT1G29200
Locus tag
AT1G29200
See related
Araport:AT1G29200
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F28N24.11; F28N24_11
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
9
Sequence:
Chromosome: 1; NC_003070.9 (10207577..10210622)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol 4-phosphate 5-kinase MSS4-like protein Neighboring gene tRNA-Glu Neighboring gene transcriptional regulator family protein Neighboring gene miscRNA Neighboring gene CBL-interacting protein kinase 18

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Van Leene J, et al. Mol Syst Biol, 2010 Aug 10. PMID 20706207, Free PMC Article
  2. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help
NM_001123905.1
NM_001123906.2
NM_102661.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables glycosyltransferase activity ISM
Inferred from Sequence Model
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
O-fucosyltransferase family protein
NP_001117377.1
  • O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G62330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_001117378.1
  • O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G62330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_174215.2
  • O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G62330.1); Has 819 Blast hits to 814 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 819; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    10207577..10210622
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001332841.1 → NP_001322313.1  O-fucosyltransferase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WGP4

  2. NM_001123905.1 → NP_001117377.1  O-fucosyltransferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001117377.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4HZX7, Q5BPY9, Q9LP49
    UniProtKB/TrEMBL
    A0A178WGP4, A0A7G2DZK4
    Conserved Domains (1) summary
    cd11299
    Location:189 → 549
    O-FucT_plant; GDP-fucose protein O-fucosyltransferase, plant specific subfamily

  3. NM_001123906.2 → NP_001117378.1  O-fucosyltransferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001117378.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B3H6X4
    Conserved Domains (2) summary
    cd11299
    Location:1 → 359
    O-FucT_plant; GDP-fucose protein O-fucosyltransferase, plant specific subfamily
    pfam10250
    Location:2 → 363
    O-FucT; GDP-fucose protein O-fucosyltransferase

  4. NM_102661.3 → NP_174215.2  O-fucosyltransferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_174215.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WGP4
    Conserved Domains (2) summary
    cd11299
    Location:73 → 433
    O-FucT_plant; GDP-fucose protein O-fucosyltransferase, plant specific subfamily
    pfam10250
    Location:76 → 437
    O-FucT; GDP-fucose protein O-fucosyltransferase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4HZX7.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.