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CAB1 chlorophyll A/B binding protein 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839871, updated on 18-Sep-2024

Summary

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Official Symbol
CAB1
Official Full Name
chlorophyll A/B binding protein 1
Primary source
TAIR:AT1G29930
Locus tag
AT1G29930
See related
Araport:AT1G29930
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AB140; CAB140; CELLULOSE SYNTHASE LIKE C8; chlorophyll A/B binding protein 1; CHLOROPHYLL A/B PROTEIN 140; CLSC8; F1N18.3; F1N18_3; LHCB1.3; LIGHT-HARVESTING CHLOROPHYLL A/B-PROTEIN 1.3
Summary
Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.
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Genomic context

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See CAB1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (10477885..10479114)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene chlorophyll A/B binding protein 3 Neighboring gene chlorophyll A/B-binding protein 2 Neighboring gene nuclear RNA polymerase A2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Blue-Light Regulation of the Arabidopsis thaliana Cab1 Gene. Gao J, et al. Plant Physiol, 1994 Apr. PMID 12232164, Free PMC Article
  2. The intergenic region of Arabidopsis thaliana cab1 and cab2 divergent genes functions as a bidirectional promoter. Mitra A, et al. Planta, 2009 Apr. PMID 19169705
  3. Arabidopsis scaffold protein RACK1A interacts with diverse environmental stress and photosynthesis related proteins. Kundu N, et al. Plant Signal Behav, 2013 May. PMID 23435172, Free PMC Article
  4. A split-ubiquitin yeast two-hybrid screen to examine the substrate specificity of atToc159 and atToc132, two Arabidopsis chloroplast preprotein import receptors. Dutta S, et al. PLoS One, 2014. PMID 24736607, Free PMC Article
  5. VH1/BRL2 receptor-like kinase interacts with vascular-specific adaptor proteins VIT and VIK to influence leaf venation. Ceserani T, et al. Plant J, 2009 Mar. PMID 19000166, Free PMC Article

See all (17) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The intergenic region of Arabidopsis chlorophyll a/b-binding protein cab1, cab2 genes faithfully drives expression of reporter genes.
    Title: The intergenic region of Arabidopsis thaliana cab1 and cab2 divergent genes functions as a bidirectional promoter.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_102733.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables chlorophyll binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables chlorophyll binding TAS
Traceable Author Statement
more info
 PubMed 
enables mRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in photosynthesis, light harvesting IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
NOT located_in Golgi apparatus RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast thylakoid HDA PubMed 
located_in chloroplast thylakoid membrane HDA PubMed 
located_in nucleus HDA PubMed 
located_in thylakoid HDA PubMed 

General protein information

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Preferred Names
chlorophyll A/B binding protein 1
NP_174286.1
  • chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    10477885..10479114
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102733.3 → NP_174286.1  chlorophyll A/B binding protein 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_174286.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P04778
    UniProtKB/TrEMBL
    A0A178WFB8, A0A178WKX1, A0A5S9WF05
    Conserved Domains (1) summary
    PLN00025
    Location:5 → 267
    PLN00025; photosystem II light harvesting chlorophyll a/b binding protein; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P04778.1

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