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ROPGEF14 RHO guanyl-nucleotide exchange factor 14 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 840052, updated on 18-Sep-2024

Summary

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Official Symbol
ROPGEF14
Official Full Name
RHO guanyl-nucleotide exchange factor 14
Primary source
TAIR:AT1G31650
Locus tag
AT1G31650
See related
Araport:AT1G31650
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATROPGEF14; F27M3.15; F27M3_15; RHO guanyl-nucleotide exchange factor 14; ROP (rho of plants) guanine nucleotide exchange factor 14
Summary
Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
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Genomic context

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See ROPGEF14 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Sequence:
Chromosome: 1; NC_003070.9 (11326251..11330791, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene AGAMOUS-like 86 Neighboring gene AGAMOUS-like 92 Neighboring gene bystin-like protein Neighboring gene Copper amine oxidase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. AtPRK2 promotes ROP1 activation via RopGEFs in the control of polarized pollen tube growth. Chang F, et al. Mol Plant, 2013 Jul. PMID 23024212, Free PMC Article
  2. Members of a novel class of Arabidopsis Rho guanine nucleotide exchange factors control Rho GTPase-dependent polar growth. Gu Y, et al. Plant Cell, 2006 Feb. PMID 16415208, Free PMC Article
  3. A new family of RhoGEFs activates the Rop molecular switch in plants. Berken A, et al. Nature, 2005 Aug 25. PMID 15980860
  4. Profiling of the Receptor for Activated C Kinase 1a (RACK1a) interaction network in Arabidopsis thaliana. Guo J, et al. Biochem Biophys Res Commun, 2019 Dec 3. PMID 31606202
  5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_102900.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within regulation of pollen tube growth IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
RHO guanyl-nucleotide exchange factor 14
NP_174446.2
  • RHO guanyl-nucleotide exchange factor 14 (ROPGEF14); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 7 (TAIR:AT5G02010.1); Has 302 Blast hits to 301 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    11326251..11330791 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001332971.1 → NP_001320846.1  RHO guanyl-nucleotide exchange factor 14 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WGS6, A0A1P8AP33, A0A5S9WJY8

  2. NM_102900.5 → NP_174446.2  RHO guanyl-nucleotide exchange factor 14 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_174446.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q56WM6, Q8GWY8, Q9C6V5
    UniProtKB/TrEMBL
    A0A178WGS6, A0A5S9WJY8
    Conserved Domains (1) summary
    pfam03759
    Location:136 → 495
    PRONE; PRONE (Plant-specific Rop nucleotide exchanger)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q56WM6.1

Gene LinkOut

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