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scpl44 serine carboxypeptidase-like 44 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 840974, updated on 18-Sep-2024

Summary

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Official Symbol
scpl44
Official Full Name
serine carboxypeptidase-like 44
Primary source
TAIR:AT1G43780
Locus tag
AT1G43780
See related
Araport:AT1G43780
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F28H19.5; F28H19_5; serine carboxypeptidase-like 44
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Genomic context

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See scpl44 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Sequence:
Chromosome: 1; NC_003070.9 (16563811..16567399)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene pseudo Neighboring gene tracheary element differentiation-related 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables serine-type carboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
serine carboxypeptidase-like 44
NP_175046.1
  • serine carboxypeptidase-like 44 (scpl44); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 42 (TAIR:AT5G42240.1); Has 3772 Blast hits to 3711 proteins in 431 species: Archae - 0; Bacteria - 430; Metazoa - 636; Fungi - 862; Plants - 1455; Viruses - 0; Other Eukaryotes - 389 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    16563811..16567399
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103506.1 → NP_175046.1  serine carboxypeptidase-like 44 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175046.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9MAR8
    UniProtKB/TrEMBL
    A0A178WN63, A0A5S9WJC3
    Conserved Domains (1) summary
    pfam00450
    Location:42 → 466
    Peptidase_S10; Serine carboxypeptidase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9MAR8.1

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