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DD18 downregulated in DIF1 18 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841087, updated on 18-Sep-2024

Summary

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Official Symbol
DD18
Official Full Name
downregulated in DIF1 18
Primary source
TAIR:AT1G45190
Locus tag
AT1G45190
See related
Araport:AT1G45190
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
downregulated in DIF1 18; F27F5.27; F27F5_27
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Genomic context

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See DD18 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (17104351..17105004)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene outer envelope pore 24B-like protein Neighboring gene RING/U-box superfamily protein Neighboring gene Glycosyl hydrolase superfamily protein Neighboring gene triacylglycerol lipase-like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_103593.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
downregulated in DIF1 18
NP_564494.1
  • downregulated in DIF1 18 (DD18); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF784, Arabidopsis thaliana (InterPro:IPR008502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF784) (TAIR:AT3G11990.1); Has 77 Blast hits to 77 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    17104351..17105004
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103593.1 → NP_564494.1  downregulated in DIF1 18 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564494.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EG53, Q9MAJ0
    Conserved Domains (1) summary
    pfam05617
    Location:86 → 156
    Prolamin_like; Prolamin-like
Nucleotide Protein
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