U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RKL1 receptor-like kinase 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841269, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
RKL1
Official Full Name
receptor-like kinase 1
Primary source
TAIR:AT1G48480
Locus tag
AT1G48480
See related
Araport:AT1G48480
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
receptor-like kinase 1; T1N15.9; T1N15_9
Summary
Arabidopsis thaliana receptor-like protein kinase (RKL1) gene
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See RKL1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (17918207..17921116)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene tRNA-processing ribonuclease BN Neighboring gene ncRNA Neighboring gene glutamine synthetase 1;5 Neighboring gene Protein kinase superfamily protein Neighboring gene jasmonate-zim-domain protein 4

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Identification of three clones which commonly interact with the kinase domains of highly homologous two receptor-like kinases, RLK902 and RKL1. Tarutani Y, et al. Biosci Biotechnol Biochem, 2004 Dec. PMID 15618630
  2. Study of natural diversity in response to a key pathogenicity regulator of Ralstonia solanacearum reveals new susceptibility genes in Arabidopsis thaliana. Demirjian C, et al. Mol Plant Pathol, 2022 Mar. PMID 34939305, Free PMC Article
  3. Members of the Plant CRK Superfamily Are Capable of Trans- and Autophosphorylation of Tyrosine Residues. Nemoto K, et al. J Biol Chem, 2015 Jul 3. PMID 25969537, Free PMC Article
  4. An extracellular network of Arabidopsis leucine-rich repeat receptor kinases. Smakowska-Luzan E, et al. Nature, 2018 Jan 18. PMID 29320478, Free PMC Article
  5. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Jaquinod M, et al. Mol Cell Proteomics, 2007 Mar. PMID 17151019, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help
NM_103744.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables identical protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in defense response to bacterium IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  
located_in nucleus HDA PubMed 
located_in plant-type vacuole HDA PubMed 
located_in plasma membrane HDA PubMed 
located_in plasmodesma HDA PubMed 

General protein information

Go to the top of the page Help
Preferred Names
receptor-like kinase 1
NP_564528.1
  • receptor-like kinase 1 (RKL1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: receptor-like kinase 902 (TAIR:AT3G17840.1); Has 150712 Blast hits to 111636 proteins in 3789 species: Archae - 114; Bacteria - 11711; Metazoa - 42617; Fungi - 8101; Plants - 71209; Viruses - 324; Other Eukaryotes - 16636 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    17918207..17921116
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103744.2 → NP_564528.1  receptor-like kinase 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564528.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B9DHQ4, Q9LP77, Q9ZT08
    UniProtKB/TrEMBL
    A0A178WLI2, A0A5S9WKJ5, B5X571
    Conserved Domains (5) summary
    smart00221
    Location:375 → 639
    STYKc; Protein kinase; unclassified specificity
    cd14066
    Location:377 → 642
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    sd00033
    Location:99 → 122
    LRR_RI; leucine-rich repeat [structural motif]
    pfam08263
    Location:33 → 69
    LRRNT_2; Leucine rich repeat N-terminal domain
    pfam13855
    Location:121 → 181
    LRR_8; Leucine rich repeat
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LP77.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials
Tools